Gene Plav_3365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3365 
Symbol 
ID5455570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3602779 
End bp3603144 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content59% 
IMG OID640878955 
Producthypothetical protein 
Protein accessionYP_001414626 
Protein GI154253802 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.911101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAAGCC GGAAAAAGTT GAAACGAACT GGTAGCGGGC GACCTGCGCT TCGACCCGGT 
TGCCCCTGCG GCAGGAGGAT CGCCGTCGGA GCGATTGCCG GCCTCGTTCC CTGTTCGCTC
ACTCTCTTCG TCATGACGTA TTCGGTATCC TGCGAGACGC CCGGAGCGGG GCTCGCCTTC
GCCGCCATCA TGATGATCGA CGTGGTCGTG ACCCTGTGCT TCGTCGCATG GGCAAGTATT
TTTGCGCAGC AAGACCTTCT GACATTTATT GCGGAACAGC CTGTGCTTAT TGACCGGGCG
ACGCGATCGC TCGAAGGAGG CGCTGGTGTC GTATTTCTCG CCGTCGCAGT CTTTGAGTTC
CTCTAA
 
Protein sequence
MRSRKKLKRT GSGRPALRPG CPCGRRIAVG AIAGLVPCSL TLFVMTYSVS CETPGAGLAF 
AAIMMIDVVV TLCFVAWASI FAQQDLLTFI AEQPVLIDRA TRSLEGGAGV VFLAVAVFEF
L