| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3361 |
|---|
| Symbol | |
|---|
| ID | 5455294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3599338 |
|---|
| End bp | 3599805 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640878951 |
|---|
| Product | ribosomal protein S6 |
|---|
| Protein accession | YP_001414622 |
|---|
| Protein GI | 154253798 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0360] Ribosomal protein S6 |
|---|
| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCTTT ACGAGCATAT ATTCATTGCG CGGCAGGACG TGTCGCAGCA ACAGGTCGAG
GCTCTCACCG AGCAGTTCTC GAACATCATC AAGGAACAGG GCGGCCAGGT CGGCAAGACC
GAATATTGGG GTCTTCGCAA CCTTGCATTC AAGGTGAAGA AGAACCGCAA GGGCCACTAC
ACGCTGGTGA ACATCGACGC GCCGCATGCG GCCGTGGCCG AGATGGAACG CCAGATGGGC
ATCAGCGAAG ACGTACTGCG CTTCATCACG GTCCGTGTCG AAGAACACGA AACCGAACCC
TCCGCGATGA TGCAGAGCCG CGGCGATCGT GGCGACCGCG GTGACCGCCG TGGCGGCGAC
CGCTTCGGCG ATCGCGACCG TGGCGATCGT GGCGACCGCG GCAGCAGCCG CTTCGGCGAC
CGCGAGCGCC CGCGCCGCGA TGACAATTCG GATGGAGGTC AGGAATAA
|
|---|
| Protein sequence | MALYEHIFIA RQDVSQQQVE ALTEQFSNII KEQGGQVGKT EYWGLRNLAF KVKKNRKGHY
TLVNIDAPHA AVAEMERQMG ISEDVLRFIT VRVEEHETEP SAMMQSRGDR GDRGDRRGGD
RFGDRDRGDR GDRGSSRFGD RERPRRDDNS DGGQE
|
|---|
| |