Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3352 |
Symbol | |
ID | 5453924 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3590931 |
End bp | 3592019 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640878942 |
Product | CDP-glucose 4,6-dehydratase |
Protein accession | YP_001414613 |
Protein GI | 154253789 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02622] CDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.45248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCATTG ACGGGCTCGA CAAGGATTTC TGGCGCGGCA AGCGCGTCCT GTTGACCGGA CATACGGGCT TCAAGGGCTC GTGGGCGGCG CTTTGGCTCT CGCGTCTTGG TGCGGATGTG ACGGGATTTG CGCTTGAGCC CGATGCCGAG CCCAATCTCT TCGCTCTGGC GCGGGTAGGG GAGGCGGTGC ACTCGCATAT CGGCGACCTG CGGGATGTGG AGGCCGTGCG CCGCGTCGTG GCCGATGCCG ATCCGCAGAT CGTGATCCAC ATGGCGGCTC AGCCTCTCGT CCGCCGTTCC TATGCCGATC CCGTGGAAAC CTTCGCCGTG AACGTGATGG GCACCGTCAA TCTTCTGCAG ACGCTTCGCA CCGTGAACGC CCTTCAAACT GTGCTCGTCG TGACGACCGA CAAGGTCTAC GAAAATGCCG AGCAGGGCAT TTCCTTTTGC GAGGATGATC CTCTCGGAGG TCACGATCCC TATGCCGCGT CGAAGGCGGC AACGGAGCTC GTCGCCGCGT CTTATGCGCG CTCCTTCTTC GCCGCGCGCG GCGTCCGGCT GGCAACGGCG CGCGGCGGCA ACGTGATCGG CGGCGGCGAT TTTTCCGAAG ACCGTCTGGT GCCGGATATC TGGCGGGCGC TTCGCAAGAA CGAGCCGCTC CTCCTGCGCA ATCCGGAGGC CGCCCGCCCA TGGCAGCATG TGCTGGATTG CCTCTGCGGC TATTTCACCT TTGTGCGCGG GCTGGCCGAT CTGCCGGATG CACCCGCCGC CCTCAATTTC GGTCCCCCGC ACGATGCGCC CGTGCTCACC GTCGCCGAAC TCGCAGGCGC GGTTCAGGCC GCGCTTGGCA GCGGCGCCAT GTGGCAGCCG GCAGCTGACC GTGGTCCCCA TGAGATGGCG ACGCTGGAAA TCGACAGCCG CCGCGCCCGC TCCCTCCTTG GCTGGCGGGA CCAGCTCGCC GGCGCGCCCT GCGTCCAGTG GCTGGCGGAC TGGTACCGCG CCTTCAACAT GGATAGCGAC ATGCGCGCGG TCACGCTTGA TCAGATTGCC GCTTACGAGG CGCTCTCTGC CAGGGTGGGG CAATCATGA
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Protein sequence | MRIDGLDKDF WRGKRVLLTG HTGFKGSWAA LWLSRLGADV TGFALEPDAE PNLFALARVG EAVHSHIGDL RDVEAVRRVV ADADPQIVIH MAAQPLVRRS YADPVETFAV NVMGTVNLLQ TLRTVNALQT VLVVTTDKVY ENAEQGISFC EDDPLGGHDP YAASKAATEL VAASYARSFF AARGVRLATA RGGNVIGGGD FSEDRLVPDI WRALRKNEPL LLRNPEAARP WQHVLDCLCG YFTFVRGLAD LPDAPAALNF GPPHDAPVLT VAELAGAVQA ALGSGAMWQP AADRGPHEMA TLEIDSRRAR SLLGWRDQLA GAPCVQWLAD WYRAFNMDSD MRAVTLDQIA AYEALSARVG QS
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