| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3348 |
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| Symbol | |
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| ID | 5456800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3587275 |
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| End bp | 3588183 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878938 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001414609 |
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| Protein GI | 154253785 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.179855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.339449 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAATAT TGTTGACCGG AGCGTCCGGT TTCGTTGGCC GTCACGCGCT CGCGGCGCTC
GTTCGGATGG GCGCCGAAGT TCATGCCGTA TCGCGCCGCC GGCCGCCCGT GCCGGGGGAC
TACGCCTGGC ATGAAGGCGA CCTTCTGGTG GCGGGCGAGG CCGGAAGGGT GATGGAAGAA
GTGCGCCCTG ATCGGGTCCT TCATCTCGCC TGGTGCGTCG AACATGGAAA ATTCTGGAAC
GACCCCGCCA ACCTCGCATG GACGGCGGCG ACACTTGAGC TGGCGGAAGC GGCGCGGCGG
TCCGGCGTCG GCCGCTTCGT CGGGGTCGGC ACCTGCTTCG AATATGATTG GCCGGAGGAG
GGACTTTGCG ACGAATTTTC GACCCCTCTC GCGGGCCACA CTCTCTATGA CACCTCCAAG
GATGCAACTC GAAGGCTTCT TGCCGCCTTC TTCGAGGATG CGGGCATAGG CTTCTCCTGG
GCGAGGCTGT TTTTCCTCTA TGGACCGGAT GAGTCGCCGG GCCGGCTTGT CTCGTCGATA
GCCCGCTCTC TCCTGTCGGA GGAACCGGCC TTGTGCTCTC GCGGCTTGAG CGTGCGCGAT
TTCATGGATG TACGCGATTG CGGTCACGCG CTCGCGGTTT TGGCCTTGTC CGGCGTGGCA
GGGCCAATCA ACATAGCCAC GGGCGAGGGA ACAAGCGTTG CTGAAATTGC GACCATGATG
GGGGAGATGG CCGGACGGCC GGACCTCATT CGCCTTGGCT CTCTGCCCGA ACGTACAAAC
GAAGCGGCCC GCATTGTTGC CGCGACAGGA AGGCTGAAAG ACGAACTTGG ATTCAAGAGT
GCACGCACGA TCGAGCAGGG GCTCCGGGAA GCGTTGTCCT TTTGGCGCGG GGCCGTGAGG
GGCGCGTGA
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| Protein sequence | MRILLTGASG FVGRHALAAL VRMGAEVHAV SRRRPPVPGD YAWHEGDLLV AGEAGRVMEE
VRPDRVLHLA WCVEHGKFWN DPANLAWTAA TLELAEAARR SGVGRFVGVG TCFEYDWPEE
GLCDEFSTPL AGHTLYDTSK DATRRLLAAF FEDAGIGFSW ARLFFLYGPD ESPGRLVSSI
ARSLLSEEPA LCSRGLSVRD FMDVRDCGHA LAVLALSGVA GPINIATGEG TSVAEIATMM
GEMAGRPDLI RLGSLPERTN EAARIVAATG RLKDELGFKS ARTIEQGLRE ALSFWRGAVR
GA
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