| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3342 |
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| Symbol | |
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| ID | 5456171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3581274 |
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| End bp | 3582296 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878932 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_001414603 |
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| Protein GI | 154253779 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.71909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGAG ACAAGGCCGC CCTGCCTCCA CTCGCGCTCA GCATGGGCGA ACCGGCGGGC
ATAGGGCCGG AAATCACATT GAAAGCGTGG GCCGCCCGCG CGGAGAAATC CTTGCCGATT
TTCTTCGTTG CCGGCGACCC GGCGCTTTAT CGCACCGCTT CGGAAAGGCT CGGTGCGGGG
GCCGCTATCC GGGAAATTTC AGATCCTTCG GAGGCGGCGG AGGTTTTTCC GGGCGCCCTG
CCCGTCCTGC CGGTTCCGCT GCATGAGGCG GCCACTCCCG GACAATTGTC GGGGGCGAAC
GCTGCGGCCG TTCTCGCATC GATCGATACG GCTTGCGACG CGGTGACGGC GGGCAAGGCA
TCGGGCCTTG TGACGAACCC GATCCACAAG CGGGTGCTCT ACGATGCAGG TTTCCACGTT
CCCGGGCATA CGGAATATCT GGCGGAGCGG ACCGGCGGCG CCAAGCCGGT GATGATGCTC
TCCTGCCCCG GGCTTCGCGT GGTGCCGGTG ACGGTTCATC TTTCGCTGAA GGATGCGGTT
GCCGTGCTCA CGACTTCGGA AATCGTCGAG CATGGCCTCA TCCTCAGCCG GTCGCTCACT
GCCGATTTCG GCATTTCCAA ACCGCGCATC GCCATCGCCG CGCTCAACCC GCATGCGGGC
GAGGAAGGCC ATCTGGGGCG AGAGGAAATC GACATCATCG CACCGGCTGC GAAGTTGCTT
GCCGAGGCGC TGCCCGGGGC GGAGATAAGC GGCCCCTTGC CCGCCGATAC GCTTTTCCAT
GCTGCGGCGA GAGCGCGCCA TGACGCCGTT CTTTGCATGT ATCACGATCA GGCGCTGATA
CCGCTCAAGA CCATCGATTT CGCGCGCGGC GTCAACATCA CTCTCGGACT GCCGATCGTT
CGCACATCGC CCGACCACGG GACGGCGCTC GACATCGCCG GGCGCGGCGT TGCCGATCCC
GAAAGCCTGA TCGAAGCTAT CCTTGTGGCC GACGAGATAA CGCGACACCG GGCGGGAGCA
TGA
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| Protein sequence | MTRDKAALPP LALSMGEPAG IGPEITLKAW AARAEKSLPI FFVAGDPALY RTASERLGAG
AAIREISDPS EAAEVFPGAL PVLPVPLHEA ATPGQLSGAN AAAVLASIDT ACDAVTAGKA
SGLVTNPIHK RVLYDAGFHV PGHTEYLAER TGGAKPVMML SCPGLRVVPV TVHLSLKDAV
AVLTTSEIVE HGLILSRSLT ADFGISKPRI AIAALNPHAG EEGHLGREEI DIIAPAAKLL
AEALPGAEIS GPLPADTLFH AAARARHDAV LCMYHDQALI PLKTIDFARG VNITLGLPIV
RTSPDHGTAL DIAGRGVADP ESLIEAILVA DEITRHRAGA
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