| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3335 |
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| Symbol | |
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| ID | 5455680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3571915 |
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| End bp | 3572850 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878925 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001414596 |
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| Protein GI | 154253772 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.593309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.179661 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTCT GGCTCAAGAG AAGTCTCGTC GCCTTGGCGG TGCTCGTCGC CATCCTTGGT
GCCGCTTATT ACTGGTTCAT CGTCGAAAGC CGGATGCCGT CCGACGCGGC CTACGCCCTC
GACATCAATG AAGTGCGCCG CATGGTCGCC GCCGTTCCCG GCGACAAGCC CGCAACCGTC
GAAGTGGAGC GCGTCGGCGC TTTCAGCTTC CCCGCAACGG CGATCGTGGC GGGTGACGGC
TGGTCGCAAC GCGATCTGCC CGTCTTCTCA TACCGGCTGG TGACGCCGGA AAGCAGCATC
ATCATCGACA CCGCGCTCAA TGCCGAACTG GGCGGCGACA ATCTCGTCGG CTTCGATGCG
GAGGCTTATG CACGCATGGA GCGGGCGATG CAGACGGCTT CGCTCATCGT CATCACGCAT
GAGCATATGG ACCATATCGG CGGCCTTACC GTGCATCCCG ATCTGCCGGC AGTCCTGCCC
GCGATGCAGT TGACGCAGGA ACAGGTCGAA AACCCGGAAC TCAGCGTGCC CGCGAAGTTC
CCGGACGGCG CGCTCTCCGC CTATGAACCG CTTGTTTACG AGAAATACAA GGTGGTCGCG
CCGGGTGTCG TGCTCATCAA GGCGCCGGGG CATTCGCCGG GCAGCCAGAT GGTTTATGTT
CAGCGTGCTG ACGGTTCTGA AATGCTCTTC ATCGGCGACG TCGCCTGGCA CTACCGCAAC
ATCGTGACCC AGCGGGAGCG CGCCCGTCTC GTCACGCAAT TTTTCCTGGA GGAAGACCGC
ACCGCCGTCT TCGGGCAGCT CGCGGCGCTG AAAAAGCTCA ATGAGGCTGA ACCGGAGATC
GCCATCGTGC CCGGCCATGA CGGCGAAATC GTCGGTGAAT TGATCGAATC GGGGGTGCTC
GCGGAAGGCT TCACCGGCGC CGCCGAAACG GAGTAG
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| Protein sequence | MSVWLKRSLV ALAVLVAILG AAYYWFIVES RMPSDAAYAL DINEVRRMVA AVPGDKPATV
EVERVGAFSF PATAIVAGDG WSQRDLPVFS YRLVTPESSI IIDTALNAEL GGDNLVGFDA
EAYARMERAM QTASLIVITH EHMDHIGGLT VHPDLPAVLP AMQLTQEQVE NPELSVPAKF
PDGALSAYEP LVYEKYKVVA PGVVLIKAPG HSPGSQMVYV QRADGSEMLF IGDVAWHYRN
IVTQRERARL VTQFFLEEDR TAVFGQLAAL KKLNEAEPEI AIVPGHDGEI VGELIESGVL
AEGFTGAAET E
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