| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3308 |
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| Symbol | |
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| ID | 5456839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3541780 |
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| End bp | 3542682 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640878898 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_001414569 |
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| Protein GI | 154253745 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0242939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.20305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGGAA TAATACTGGC TGGCGGAAGC GGCACCCGCC TCTACCCGAT AACGCGTGCC
GTGTCCAAAC AGTTGCTGCC GGTTTACGAC AAGCCGATGA TCTATTACCC GCTCACAACA
CTGATGCTTG CTGGCAGCCG GGACATCCTC GTCATAACTA CACCGCATGA CGCCGCTGCC
TTCCAAAATC TCCTAGGAGA TGGAAATCAG TGGGGCATTT CGATTTCCTA CGCTGTGCAG
CCGAACCCCG AAGGCCTGGC GCAGGCATTC CTTATCGGCC GGCATTTCAT CGCCGGGGAG
AGATGTGCCC TGGTTCTCGG CGACAACATA TTCTACGGCA ACGGGCTCTC CGGCATCCTC
CAACGCGCCG CTTCCCGGAA GAACGGCGCC ACGGTGTTCG GCTACTGGGT CGCCGACCCT
GAACGATATG GAGTCGTGGA GTTTGACCGG GACGGAAACG CGATTTCAAT CGAAGAGAAA
CCGAAGAGGC CCAAATCACC CTACGCGGTC ACCGGTCTTT ATTTTTACGA CGAGCAGGTG
GTCGATATGG CCGCGGAAAT TCGACCTTCA GCACGAGGCG AGCTGGAGAT TACCACGCTC
AACAATATGT ACCTGGATCG AGGATGCCTG ACAGTGGAAA TCCTGGGTCG TGGTTTCACG
TGGCTCGACA CAGGCACTCA CCAGACATTG CTGCAGGCGA GCCAATTTGT CGAAACGATC
GAAGAGCGCC AGAACCTCAA GATCGGCAGT CCCGATGAGG TTGCCTACCG TCTTAAGTAT
ATCGATGCGG ATCAACTTAT TGCCCTTGCC GCGAGCTGCG GTAACAACGG GTACAGTAAT
TACCTCAAGC TGCTTACCCG AGAAGAGTAT CAGCCTCCGG CGCCGGGCGC AGGAAGGGCA
TAG
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| Protein sequence | MKGIILAGGS GTRLYPITRA VSKQLLPVYD KPMIYYPLTT LMLAGSRDIL VITTPHDAAA
FQNLLGDGNQ WGISISYAVQ PNPEGLAQAF LIGRHFIAGE RCALVLGDNI FYGNGLSGIL
QRAASRKNGA TVFGYWVADP ERYGVVEFDR DGNAISIEEK PKRPKSPYAV TGLYFYDEQV
VDMAAEIRPS ARGELEITTL NNMYLDRGCL TVEILGRGFT WLDTGTHQTL LQASQFVETI
EERQNLKIGS PDEVAYRLKY IDADQLIALA ASCGNNGYSN YLKLLTREEY QPPAPGAGRA
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