| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3302 |
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| Symbol | aspS |
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| ID | 5456485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3534351 |
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| End bp | 3536174 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878893 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_001414564 |
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| Protein GI | 154253740 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.465914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAGTT TTCGCAGCCA CACCAGTGGC GAGCTTCGCA AGTCGCATGT GGGGGAGACG
GTGCGTCTCG CTGGCTGGGT CCATCGCAAG CGCGACCATG GCGGCCTCCT TTTCATCGAC
CTGCGGGACA ATTACGGGCT GACCCAGCTC GTCTTCGACC CGGACCGGGC GGAGGCATTT
GCCCTGGCGG AAAAGCTGCG CGCGGAATAT GTCGTCGCGA TCGAGGGCAA GGTCGTCGCC
CGGTCCGCCG AGACCATAAA CGCGAACCTG CCGACCGGGG ATATCGAGAT TGCCGTTTCC
TCGATGGAAG TGCTGTCCGA AGCGCAGGAC CTGCCGCTGC CGGTATTTGG CGAGCCTGAC
TATCCGGAAG ACATTCGTCT CACATACCGC TTCCTCGACC TGCGCCGCGA GACGCTGCAC
AGGAATATAT TGCTCCGCTC GAAGATCATC GCCGATATCC GACGCCGCAT GACGGAGGTG
GGGTTCAACG AATTCCAGAC GCCGATCCTG ACCGCGTCGA GCCCGGAAGG CGCGCGCGAC
TTCCTGGTGC CGTCGCGCAT GCATCCCGGC AAGTTCTATG CACTGCCGCA GGCGCCGCAG
CAGTTCAAGC AGCTCATCAT GGTGGCGGGC TTCGACCGCT ACTTCCAGAT CGCGCCCTGC
TTCCGCGACG AGGATGCGCG CGCCGACCGC TCGCCTGGCG AATTCTATCA GCTCGATGTC
GAGATGAGCT TCGTGACGCA GGACGATGTC TTCGCCGCCA TAGAGCCGGT GTTGCACGGT
CTGTTCGAGA AATTCGCGGA AGGCAAGAAG GTCTCGTCCT ATCCGTTCAC GCGCATCCCT
TATGCGGAAG CGATCCGCAA ATACGGCTCC GACAAGCCGG ATCTGCGCAA TCCGATCGTC
ATGGAGAGCG TCACCGATCA TTTTCGCGGT TCGGGCTTCA AGGTCTTCGC GGGACTGATC
GAAAAGGACT CCAAGGTCGA GGTCTGGGCG ATCCCGGCGC CGGGCGGCGG CAACCGCGCC
TTCTGCGACC GCATGAATTC ATGGGCGCAG GGTGAAGGCC AGCCGGGCCT CGGCTACATC
TTTTTCCGCG AGGAGGGCGG TGCGCTGGAA GGCGCGGGGC CCGTGGCGAA GAATATCGGC
CCAGAACGCA CCGAAGCGAT CCGCACGCAG CTTGGGCTGA AGGCGGGCGA CGCGGTTTTC
TTCGTTGCCG GCGTGCCGGC CAAAACGGCG AGCTTTGCCG GTCTTGCGCG AACCCGTGTC
GGCACGGAGC TCGGGCTGAT CGAAGAGGAT ATTTTCAAGT TCTGCTGGAT CGTCGACTTC
CCGATGTTCG AATGGAACGA GGACGAGAAG AAGATCGACT TCTCGCATAA TCCGTTCTCG
ATGCCGAACT ATCCGCTCGA CAAGTTCCTC AAGCTCGACA AGGACAATGC CGACGAGATC
CTGGGCATGA CGGCGTTTCA GTACGACATC GTCTGCAACG GCGTCGAGCT TTCCTCCGGC
GCCATCCGCA ATCATAAGCC GGATGTCATG TACAAGGCCT TCGAGATCGC GGGCTACGAC
AAGTCCGTGG TCGAGACGAA GTTCGGCGGC ATGCTGAACG CCTTCAAATA TGGCGCCCCG
CCGCATGGCG GCCTCGCGCC CGGCATCGAC CGGATGGTAA TGCTGCTCGC GGGCGTGGAG
AACCTCCGTG AAGTGACGAT GTTCCCGATG AACCAGCAGG CGCAGGATCT TCTGATGCAG
GCGCCGTCCG AGGTCGAGCC GAAACAGCTC AAGGAACTCC ACATCCGCGT CGTCCCGCCG
CTGGAAAAGA AAAAGGAAGG CTGA
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| Protein sequence | MSSFRSHTSG ELRKSHVGET VRLAGWVHRK RDHGGLLFID LRDNYGLTQL VFDPDRAEAF
ALAEKLRAEY VVAIEGKVVA RSAETINANL PTGDIEIAVS SMEVLSEAQD LPLPVFGEPD
YPEDIRLTYR FLDLRRETLH RNILLRSKII ADIRRRMTEV GFNEFQTPIL TASSPEGARD
FLVPSRMHPG KFYALPQAPQ QFKQLIMVAG FDRYFQIAPC FRDEDARADR SPGEFYQLDV
EMSFVTQDDV FAAIEPVLHG LFEKFAEGKK VSSYPFTRIP YAEAIRKYGS DKPDLRNPIV
MESVTDHFRG SGFKVFAGLI EKDSKVEVWA IPAPGGGNRA FCDRMNSWAQ GEGQPGLGYI
FFREEGGALE GAGPVAKNIG PERTEAIRTQ LGLKAGDAVF FVAGVPAKTA SFAGLARTRV
GTELGLIEED IFKFCWIVDF PMFEWNEDEK KIDFSHNPFS MPNYPLDKFL KLDKDNADEI
LGMTAFQYDI VCNGVELSSG AIRNHKPDVM YKAFEIAGYD KSVVETKFGG MLNAFKYGAP
PHGGLAPGID RMVMLLAGVE NLREVTMFPM NQQAQDLLMQ APSEVEPKQL KELHIRVVPP
LEKKKEG
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