Gene Plav_3295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3295 
Symbol 
ID5456064 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3526006 
End bp3526413 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content66% 
IMG OID640878886 
Productcellulase-like protein 
Protein accessionYP_001414557 
Protein GI154253733 
COG category[S] Function unknown 
COG ID[COG4765] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0728975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCACC TCGCGCGCCT TGCCGCCGCA TCGGCCATTC TCTGCCTTTC GGCCGCGCCG 
GCATTCGCGG ACAAATATCC CGTCGCCGTC TTCAGCGGCC TCGATAAGAC GACCGCGCGC
GTCACAAGCT TCAGCGTAAA GGTGGATGAG CCTGCGCAAT TCGGCTCGCT GGAGGTTCTC
GTCCGCGCTT GCGACAAGCG GCCGCCGGAA GAGCCGCCGC AGACGGCCGC TTTCCTCGAA
ATCCGCCAGA TCGACCGCGA CGACGACAGC GTTCAGCCGG CGCCGATTTT CGAGGGATGG
ATGTTTGCCG AAAGCCCCGG CCTGAACGGC CTCGAGCACC CTGTCTACGA CATCTGGGTG
ACGGACTGCA AAACCGCCTC CGGCGGCGCA TCGACCGGCA GCGAGTAG
 
Protein sequence
MRHLARLAAA SAILCLSAAP AFADKYPVAV FSGLDKTTAR VTSFSVKVDE PAQFGSLEVL 
VRACDKRPPE EPPQTAAFLE IRQIDRDDDS VQPAPIFEGW MFAESPGLNG LEHPVYDIWV
TDCKTASGGA STGSE