| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3290 |
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| Symbol | |
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| ID | 5456167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3520964 |
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| End bp | 3521422 |
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| Gene Length | 459 bp |
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| Protein Length | 152 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640878881 |
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| Product | 3-dehydroquinate dehydratase |
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| Protein accession | YP_001414552 |
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| Protein GI | 154253728 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
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| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.267239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCAAAC AGAGTTCCAA AGCGGCCGCG AAGCCTGTCT TCGTGCTCAA CGGCCCGAAC
CTCAACCTGC TGGGCCAGCG GGAGCCGGAA ATCTATGGCA GCACGACGCT GGCCGATATC
GAGAAGCTGG TGAAGGCGCG GGCGAAGACA CTTGGCCTCA CCGTCGATTG CCGTCAGTCG
AACCATGAGG GCGAACTGGT GGACTGGATT CAGGAGGCGC GCGGAAGCGC GGCGGGCCTG
ATCCTCAATG CGGGCGCCTA TTCGCACACA TCCATTGCCA TTCACGATGC GCTGGCGACG
CTCGACATTC CCATTATCGA GGTTCACATC TCGAATATCT ACAAGCGCGA AAGCTTCCGG
CACCATTCCA CCGTGTCTTC AGTCGCCACC GGCCTCATCT GCGGCCTCGG CACGATCGGA
TACGAATTGG CGCTCGAAGC CGTAAAATCA AAAATCTGA
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| Protein sequence | MAKQSSKAAA KPVFVLNGPN LNLLGQREPE IYGSTTLADI EKLVKARAKT LGLTVDCRQS
NHEGELVDWI QEARGSAAGL ILNAGAYSHT SIAIHDALAT LDIPIIEVHI SNIYKRESFR
HHSTVSSVAT GLICGLGTIG YELALEAVKS KI
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