Gene Plav_3287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3287 
Symbol 
ID5455660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3519188 
End bp3519637 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content57% 
IMG OID640878878 
Producthypothetical protein 
Protein accessionYP_001414549 
Protein GI154253725 
COG category[S] Function unknown 
COG ID[COG2323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.581053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCA TTCTCCGCGC CGTTGCGATC TATGTGTTTC TCCTCATCAT CTTCCGCATT 
TCGGGACGCC GCACCTTTTC GGAAATCACC ACATTCGATT TTGTCCTTCT GCTGATCATC
GGCGAGGCGA CGCAACAGGG GCTTCTCGGC GACGATTTTT CGGTGACGAA TGCCTTTCTC
ATCATCTCGA CGCTCATCAT CATCGATATC GGGCTGTCGC TGTTCAAACG GTATGTGCCT
GCCTCCGGCA AGATCCTCGA CGGTGTACCG ATGCTGCTGG TGGAAGACGG CGAGCCGCTG
CACGAGCGGA TGAAGAAAGC GCGTGTGAAC GAATACGACA TCATGGAAGC GGCGCGCCGA
AGCCAGGGGC TCGAACGGAT GGACCAGATC AAATATGCGG TGCTGGAGGT GAGCGGGACG
ATCAGCATCG TGCCGAAGCC GAAGGAGTGA
 
Protein sequence
MDAILRAVAI YVFLLIIFRI SGRRTFSEIT TFDFVLLLII GEATQQGLLG DDFSVTNAFL 
IISTLIIIDI GLSLFKRYVP ASGKILDGVP MLLVEDGEPL HERMKKARVN EYDIMEAARR
SQGLERMDQI KYAVLEVSGT ISIVPKPKE