| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3277 |
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| Symbol | |
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| ID | 5453685 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3505612 |
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| End bp | 3507066 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640878868 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_001414539 |
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| Protein GI | 154253715 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.131328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATCG GCAGGCGTGA AATGAGGACG GGGAAGGGGG CTGGCTTGTG CCTGGCGCTC
GCCGCTGGCC TGTTTGCCGG CCTGCTCACG CACTCTCCCG CCCAAACCGC CCATGCGGAC
GACCTCGAAG CTCTCATTCA GGCCGACCTC GAAAACGACC TTCGCCGGGC CGCTCCCGGC
CCGCGCACGC TCGATGCCTC CCTCGAAGAA GCGGCCCGCG AAAACGACGC GCTGCAAACC
GGCGCCCTGA ACGATGCCAT ATCCGCCGTG CCGGTGGCGC CCGTCGCGCC GCCCGGCGGC
GCCGCCGTCA CCTCCATCCG CCTCGGCGAT CACGGCGAGC AGACGCGCTT TGTGCTGGAA
CTCTCCGGCG ACGCCGCCGC CGACTATCAG GTCTTCACCC TTGCCGAGCC CTACCGCGTC
GTCATCGACA TTCGCGGCGT CCCGTTCCAT CTCGTCGAGG AGCCGGTGAA GAAGGGCAAG
GGCTTCGTCT CCGGCTACCG CTATGGCCGC TTTCAGGCCA ATACCTACCG CGTGGTGATC
GACGTGGCGC AGCCGGTCGA AGTCGCGCGC GATTTCGTGC TCGATCCGCA GGCAGGCTTT
GGCCGCCGCA TCGTTCTCGA TCTCGCCTCG ACCGATCTCG CCACCTTCAC CGCCAATGCC
GGCCTTCCCG AGGGCGAAAA AGCCGCCGCC GTCGAGGCTG CCGAGCAGAT GGCGAACGTC
GCCGCCGTTC CAGTCAGCCC GCCCGCCGCG CGCCTTGAGC GCCGCCGCGT CGTCGTCATC
GATGCCGGGC ATGGCGGCGT CGATCCGGGA ACCAAGGGCC GCACCGGCGT CTATGAAAAG
GATGTCGTCC TCGCCTTCGC GAAGCAATTC GGCGAGGAAT TGCGCTCCTC CGGCCGCTAT
GAAGTCCACC TCACGCGCGA GACCGACATC TTCCTGCCGC TCCGCCAGCG CGTCGCCATC
GCCCGCCAGC ACAAGGCGGA CCTCTTCATT TCCGTCCATG CGGACGCGAT CCACAAGCCC
ACCGTGCGCG GCATGTCGGT CTATACCCTC TCCGAAACCG CATCGGACGC GGAAGCCGCC
GCCCTCGCGC GCAAGGAAAA CCAGGCCGAC CTCATCGCCG GCCTCGACCT GAAAGGCGAA
AGCCCGGAAG TCACCGGCAT CCTGATCGAC CTCGCCCAGC GCGAAACCAA GAATTATTCC
TCGCGCTTTG CCAAGTCGGT CGTCGATTAC GCGAGCCAGA ACACCGTCAC GCTCGATCCC
GCGCACCGTT TCGCCGGTTT CGTCGTGCTG AAGGCGCCGG ACGTGCCCTC CGTGCTGATC
GAGCTCGGCT TCCTCACCAA TGCCGATGAC GAGAAGCTCA TCACCTCGCC CTCATGGCGC
GCCAACATGG CCCGCGCCCT GTCCCGCGCC GTCGACCGCT ATTTCGGCGA CCGCATGGCC
GAGGGCCCGA ACTAG
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| Protein sequence | MRIGRREMRT GKGAGLCLAL AAGLFAGLLT HSPAQTAHAD DLEALIQADL ENDLRRAAPG
PRTLDASLEE AARENDALQT GALNDAISAV PVAPVAPPGG AAVTSIRLGD HGEQTRFVLE
LSGDAAADYQ VFTLAEPYRV VIDIRGVPFH LVEEPVKKGK GFVSGYRYGR FQANTYRVVI
DVAQPVEVAR DFVLDPQAGF GRRIVLDLAS TDLATFTANA GLPEGEKAAA VEAAEQMANV
AAVPVSPPAA RLERRRVVVI DAGHGGVDPG TKGRTGVYEK DVVLAFAKQF GEELRSSGRY
EVHLTRETDI FLPLRQRVAI ARQHKADLFI SVHADAIHKP TVRGMSVYTL SETASDAEAA
ALARKENQAD LIAGLDLKGE SPEVTGILID LAQRETKNYS SRFAKSVVDY ASQNTVTLDP
AHRFAGFVVL KAPDVPSVLI ELGFLTNADD EKLITSPSWR ANMARALSRA VDRYFGDRMA
EGPN
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