Gene Plav_3266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3266 
SymbolanmK 
ID5457015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3488320 
End bp3489438 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content64% 
IMG OID640878857 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_001414528 
Protein GI154253704 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGTG CTCTGGGACT GATGAGCGGC ACCTCGCTCG ACGGGATCGA CGCAGCCATC 
GTCGAGACAG ACGGCGAAGG TGCCGTGCGC TCAGGCCCCT CGCTCGCGGT GCCTTACAAG
CCGGAAGAGC GACTTTTGCT CAGCCTGGCT CTGGAGGCAG CGAAGAGCTG GGAACCCGAA
GACCCGATGC CGGAAGAGAT TGCCGAGGCG GAGCGCCATC TGACGCTCGC AAACGCGCTG
GCGGTCCGGT CTCTTCTGAA TGAGGCGGGG TTGAAGCCTG CGGATGTTTC CGTGATCGGC
TTCCACGGTC AAACCGTGCT TCATCAGCCG GAACGGCGCC GCACGGTTCA GATAGGCCTT
GGCGAGGTCC TGGCGCGATT GACCGGTATC GACGTGATAA ACGATTTCCG CAGTGCGGAC
GTCGCGGCGG GCGGGCAAGG CGCGCCGCTC GTGCCGCTCT ATCACCAGGC ATTGGTCAGA
AGCGCGGGCG TCAAGGAGCC AGTTGCCCTC ATCAATATCG GCGGCGTCGG CAATATCACC
TACGTGGGGA CCGACGGGAC GTTACTTGCC TTCGACACGG GCCCGGGTAA CGCTTTGATT
GACGACTGGG CTCTCATGCA CACCGGTGAG CCGTTGGACC GGGACGGCTC GCTCGCCTCG
GCCGGCGAGG TCGACATGGA TGCTCTCGAA GCGCTGATGG AGCATGCTTT CTTCGACGCA
CCTCCGCCGA AGTCGCTGGA CCGCTTCTCC TTTTCGCCGG ATGCGGTAAG GCATCTGCTT
CCACCCGATG GTGCTGCAAC GCTCACCGCC TTCACCGTCG AGGCAATTGC ACGCGGCCTT
GCCCATGTGC CAGGGGTGCC TTCGCGCTTC ATCGTTTGCG GGGGAGGGCG GCATAATCCC
GTGATGATGT CCATGCTGAG TAGAAGGCTT CAGGGTGGCG TATTGCCGGC TGAAGACCTC
GGCTGGCGGG GAGACGATGT CGAGGCAGAG GCGTTTGCCT ATCTCGCCGT CCGGTCGCTG
CGCGGCCTAC CGCTCAGCTT GCCGACCACG ACAGGCGTGC CTGAACCGAC GCGCGGCGGA
CGGCTTCACA GGGCGGGAGA GCCAGAGCCG CAAGTATAA
 
Protein sequence
MIRALGLMSG TSLDGIDAAI VETDGEGAVR SGPSLAVPYK PEERLLLSLA LEAAKSWEPE 
DPMPEEIAEA ERHLTLANAL AVRSLLNEAG LKPADVSVIG FHGQTVLHQP ERRRTVQIGL
GEVLARLTGI DVINDFRSAD VAAGGQGAPL VPLYHQALVR SAGVKEPVAL INIGGVGNIT
YVGTDGTLLA FDTGPGNALI DDWALMHTGE PLDRDGSLAS AGEVDMDALE ALMEHAFFDA
PPPKSLDRFS FSPDAVRHLL PPDGAATLTA FTVEAIARGL AHVPGVPSRF IVCGGGRHNP
VMMSMLSRRL QGGVLPAEDL GWRGDDVEAE AFAYLAVRSL RGLPLSLPTT TGVPEPTRGG
RLHRAGEPEP QV