| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3259 |
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| Symbol | |
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| ID | 5455053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3480848 |
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| End bp | 3482092 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640878850 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_001414521 |
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| Protein GI | 154253697 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.797453 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCC CCGTTCTCAA GCCCGAAACC TACGATGTAG AAAGAATTCG TGCTGATTTC
CCGATCCTTT CGCAGAAAGT TTACGGCAAG CCGCTCGTCT ATCTCGACAA TGCCGCGTCC
GCCCAGAAGC CGCAATCGGT GATCGATGCG GTAACGGATG CGTATTCACA TGAGTATTCG
AATGTGCATC GGGGCATGCA CTACCTGTCC AACGCCGCGA CTGAAAAATT CGAACAGGCG
CGCGAGACAG CGCGAAGCTT TCTCAATGCA GCGTCGACGG ATGAGGTTGT CTTCACATCT
GGGGCAACAG ATGCGATCAA CCTCGTTGCT TCCTCGTTTG TGGAAGCGGG AATAAAGCCA
GGCGATGAAA TCATCCTCTC GGTCCTTGAG CATCATTCGA ACATCGTTCC TTGGCATTTT
CTCCGTGAAC GTCACGGTGC GGTATTGAAA TACGTGCCGG TGATGGATGA GGGGGATCTC
GACGTCGAGG CTTACGAACA ACTCTTCAGC CCTCGCACAA AGATGGTTGC GCTGACCCAG
ATGTCGAACG CGCTCGGAAC AATAACGCCG ATCAAGGAGA TGATCCGGAT CGCACACGAA
CACGGCGTGC CTGTTCTCGT CGACGGTTGC CAAGGCGTTG TCCATATGCC GACCGACGTT
CGCGAACTTG ATTGCGATTT TCTCGTCTGC TCGGGCCACA AACTCTATGG TCCGACAGGC
ATAGGTCTTC TCTATGGCAA GATCGAGCAC CTGAAGACGA TGCGGCCTTA CCGCGGTGGC
GGCGAGATGA TCCGGGAGGT CGGTCTGGAG AATATTACTT ATGCCGCGCC GCCGCACCGC
TTCGAAGCGG GTACGCCCGC CATCGTCCAG GCTATTGGGC TCGGCGCTGC GCTTTCCTAT
ATTGAATCTG TTGGGCGCGA CAATATCGCA GCCCATGAGG TGCAACTCCG GGATTATGCG
ACACGCCGCC TTTCTGAAAT AAACAGTCTC CGGATCATCG GCACGACGAA ATCGAAAGGC
AGTATCATCT CTTTCGTGAT GGAAAATGCA CACCCGCACG ACATCGCGAC GGTGATAGAC
AGGGCGGGAG TGGCTGTGCG AGCCGGCCAT CATTGCGCGC AACCTGTCAT GGAGCGTTTC
GGTGTCGGCG CTACAACGCG AGCGTCTTTC GCCATGTACA ATACGCTGGA AGAGGTGGAC
CGCCTGGCAG AGGCGCTCAT CGACAGCAAG AAGTTCTTTG GGTAA
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| Protein sequence | MNSPVLKPET YDVERIRADF PILSQKVYGK PLVYLDNAAS AQKPQSVIDA VTDAYSHEYS
NVHRGMHYLS NAATEKFEQA RETARSFLNA ASTDEVVFTS GATDAINLVA SSFVEAGIKP
GDEIILSVLE HHSNIVPWHF LRERHGAVLK YVPVMDEGDL DVEAYEQLFS PRTKMVALTQ
MSNALGTITP IKEMIRIAHE HGVPVLVDGC QGVVHMPTDV RELDCDFLVC SGHKLYGPTG
IGLLYGKIEH LKTMRPYRGG GEMIREVGLE NITYAAPPHR FEAGTPAIVQ AIGLGAALSY
IESVGRDNIA AHEVQLRDYA TRRLSEINSL RIIGTTKSKG SIISFVMENA HPHDIATVID
RAGVAVRAGH HCAQPVMERF GVGATTRASF AMYNTLEEVD RLAEALIDSK KFFG
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