Gene Plav_3256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3256 
Symbol 
ID5454086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3479096 
End bp3479887 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content58% 
IMG OID640878847 
Productenoyl-CoA hydratase 
Protein accessionYP_001414518 
Protein GI154253694 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.184052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCG AACGGGTCAA ACTTGATGTC GACGGTAATG TAGGCACGCT GACACTCAAC 
CACCCCGAGG TGATGAACGC AGTATCGCCG GAAATGCTGG GCGGTCTTAT GCGAGCGCTC
GATGCAGTGG AAGACGCCGC AAATGGTGTC CGCTGCCTTA TCATGACAGG CGAGGGTCGC
GGTTTTTGCA CCGGCGCCAA TCTTCAAGGA CGGGGCGATA ATTCCGGCGC CCGGCCAGAT
GCCGGGTCGG CCCTTGAAAC GATGTATCAT CCGTTCCTGC GCCGACTGCG TAACCTGAAG
ATGCCGTTCG TAACCGCCGT TAATGGTCCT GCGGCAGGCG TGGGCATGAG CTTCGCGTTG
ATGGGCGATC TCGTGCTTTG CGCGCGCTCT TCTTATTTTC TGCAGGCTTT CCGGCGCATT
GGTCTGGTGC CCGATGGCGG CTCAACATGG ATACTACCCC GGCTCGTCGG CAAAGCCCGC
GCAATGGAGC TGTCGCTGCT TGGCGAAAAG CTGCCGGCGG AGACCGCGCT TCAATGGGGT
CTCGTCAATC GAGTTTATGA TGACGAAAAG TTGCTGGAAG AGGCGAAAGC TCTTGCGGCT
CACCTTGCCA GTGGACCAAC CAAGACACTG GGCATGATCC GTCAGCTCTA TTGGGAGAGC
ACGGACAATA CTTACGAAGA GCAGCTGAAT CTCGAGCGGC AGCTTCAGCG GACCGCCGGC
TATGGCGAAG ATTTCAAGGA GGGAGTGCGT GCTTTCCTCG AGAAGCGCCC CGCCCAATTC
AAAGGAAACT GA
 
Protein sequence
MDFERVKLDV DGNVGTLTLN HPEVMNAVSP EMLGGLMRAL DAVEDAANGV RCLIMTGEGR 
GFCTGANLQG RGDNSGARPD AGSALETMYH PFLRRLRNLK MPFVTAVNGP AAGVGMSFAL
MGDLVLCARS SYFLQAFRRI GLVPDGGSTW ILPRLVGKAR AMELSLLGEK LPAETALQWG
LVNRVYDDEK LLEEAKALAA HLASGPTKTL GMIRQLYWES TDNTYEEQLN LERQLQRTAG
YGEDFKEGVR AFLEKRPAQF KGN