| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3250 |
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| Symbol | |
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| ID | 5456966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3470183 |
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| End bp | 3472222 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878841 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001414512 |
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| Protein GI | 154253688 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.629772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.680031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCC GCAAGACGAG CAAATCCGAC GATACAGACG ACCTTTTTGC CGCCGCTCCG
AAGGCGGCAA AACCTGCGAG AGCTCCGAAA GGGGCGCCGC GGGACGATGG CACCTATTCC
GCGAAGGATA TCGAGGTTCT GGAGGGGCTT GAGCCCGTGC GGCGGCGGCC GGGCATGTAT
ATCGGCGGCA CCGACGAGAA GGCATTGCAT CACCTTTTCG CGGAAGTGCT CGACAACTCC
ATGGACGAGG CCGTTGCCGG CCATGCCAAC TGGATTGAAG TCACGGTGTC GGAGGATGGA
AGCCTGACCG TCGCGGATAA CGGTCGCGGT ATTCCCGTGG ACCCGCATCC GAAGTTCAAG
AACAAGTCGG CGCTGGAAGT CATTCTCACG ACACTCCACT CCGGCGGGAA GTTCGGCGGC
AAGGCCTATG AGACATCGGG CGGCCTGCAC GGCGTCGGTG TATCGGTGGT GAACGCGCTG
TCGGACCGTT TCGAGGTCGA GGTCGCACGC GACCAGACAC TTTACACGCA GAGCTACGCT
CGCGGCGTAC CAACAACCAA GCTCACGGAC AAGGGGCGCA CTCAGAACCG CCGCGGAACG
AAAATTACGT TCCATCCGGA TGCCGACATC TTCGGCAAAG GCGCGCATTT CATTCCCAAG
CGTCTCTACA AGATGGCACG TTCCAAAGCC TATCTTTTCG GCGGCGTCGA AATCCGCTGG
AACTGCGCGC CATCGCTCAT CGGCGAGAAG GACGATACGC CGGTAAATGA TGTGCTGCAT
TTCCCGGGCG GTCTCGTCGA TTACCTCAAG GCATCGATCA ACGGCTACGA CACGGTAACG
GCGGAACCCT TTACCGGAAA AGTCTCGCGG GCGGGAAGCC ATGGCTCGGT GGAATGGGCA
ATCGCCTGGT TTGGCGGCGG TGACGGATTT CTCAACTCCT ATTGCAACAC CGTGCCCACG
GCTGAGGGCG GTACACACGA AGCGGGACTG CGCGCGGCAC TGACCAAAGG CCTGAAGGCC
TATGCAGATA TGGTGGGCAA CAAGAAGGCG GCACAGATAC AAGCCGAAGA TGTTCTCGGG
ACAGCCGGCG CCATGCTTTC AGTGTTCATT CGCGAACCCG AATTCCAGGG GCAGACGAAG
GAAAAACTGG CGAGCGCGGA AGCGCAGCGT TTGGTCGAGC GGGCCATCGG CGACCATTTC
GACCATTGGC TTACAGCCGC ACCTCAACAG GCAAACAAGC TGCTCGACTG GGTGATCGAT
CGCGCCGACG ACCGGCTTCG CCGGCGGCAA GAGAAGGACG TGGCACGCAA GAGCGCAACG
CGGAAACTGC GCCTGCCGGG CAAGCTTGCC GATTGCAGTC AGTCGGCTGC TGACGGATCG
GAGATATTTC TCGTCGAAGG TGACAGCGCC GGCGGCTCGG CAAAGCAGGC GCGCGACCGC
GCAAGCCAGG CGATCCTGCC TCTACGGGGC AAGATATTGA ACGTGGCAAG CGCAAGCGGA
GCGAAACTCG CGCAGAGCCA GCAGATTTCC GACCTCATTC AGGCGCTAGG CGTCCGCACG
GGATCGCATT ACCGGCAGGC CGACCTCCGC TATGACAAGG TCATCATCAT GACCGACGCC
GACGTGGACG GAGCACACAT AGCCTCGCTT CTTATTACAT TCTTCTATCG CGAGCTTCCG
GAGCTTATTC GAGAGGGACA TCTCTATATG GCGGTGCCGC CGCTCTACAA GCTGACGCAA
GGCGGCAAGA CCCTCTATGC TCGTGACGAT GCGCACAAGG ACGAACTGCT CAAGGCGGAG
TTTTCCGGTC GCGGCAAGGT TGAGATCAGC CGCTTCAAAG GGCTTGGCGA AATGATGCCC
GCTCAGTTGA AGGAGACGAC CATGGCGCGC GGCAAGCGAA CGCTGATGCG AGTGGTTGTT
CCCGAAGCTG AAGCGAAAGA GACGAGCGGT GCCATCGAGC GGTTGATGGG AAACAAACCG
GAGCTCCGTT TCCAGTTCAT CCAAGAGCAT GCGGCTTTCG CTCACGATCT CGACATCTAG
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| Protein sequence | MAARKTSKSD DTDDLFAAAP KAAKPARAPK GAPRDDGTYS AKDIEVLEGL EPVRRRPGMY
IGGTDEKALH HLFAEVLDNS MDEAVAGHAN WIEVTVSEDG SLTVADNGRG IPVDPHPKFK
NKSALEVILT TLHSGGKFGG KAYETSGGLH GVGVSVVNAL SDRFEVEVAR DQTLYTQSYA
RGVPTTKLTD KGRTQNRRGT KITFHPDADI FGKGAHFIPK RLYKMARSKA YLFGGVEIRW
NCAPSLIGEK DDTPVNDVLH FPGGLVDYLK ASINGYDTVT AEPFTGKVSR AGSHGSVEWA
IAWFGGGDGF LNSYCNTVPT AEGGTHEAGL RAALTKGLKA YADMVGNKKA AQIQAEDVLG
TAGAMLSVFI REPEFQGQTK EKLASAEAQR LVERAIGDHF DHWLTAAPQQ ANKLLDWVID
RADDRLRRRQ EKDVARKSAT RKLRLPGKLA DCSQSAADGS EIFLVEGDSA GGSAKQARDR
ASQAILPLRG KILNVASASG AKLAQSQQIS DLIQALGVRT GSHYRQADLR YDKVIIMTDA
DVDGAHIASL LITFFYRELP ELIREGHLYM AVPPLYKLTQ GGKTLYARDD AHKDELLKAE
FSGRGKVEIS RFKGLGEMMP AQLKETTMAR GKRTLMRVVV PEAEAKETSG AIERLMGNKP
ELRFQFIQEH AAFAHDLDI
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