Gene Plav_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3247 
Symbol 
ID5456487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3467386 
End bp3468693 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content63% 
IMG OID640878838 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001414509 
Protein GI154253685 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATA ATGTCGATAT CTCGTCGCCG CTGACGCTGC CTTGCGGCGC CACGCTGAAG 
AACCGGATCG CCAAGGGAGC CATGACCGAG GGGCTGGGCG ACTCCCTGAA CCGCGCGACC
GAGGGACACG CCCGGCTCTA CCGCCGCTGG GCGGAGGGCG GCGCCGGAAT GCTTCTCACC
GGCAATGTGC AGATCGACCG GCGCTGCATG GAGCGCCCCG GCAATGTGGC CATTGACGGT
CCGCAATCGA ATGAGGCCAT CGCGGCGCTT CGCAATTATG CGAAAGCGGG AACGGTGAAC
GATACGCATC TCTGGATGCA GATTTCGCAT GCAGGACGCC AGACGCCCGC ATCCGTCAAC
AAGGAGCCGC TTGCGCCCTC TGCAACGCCA CTCGCGATGC CGGGCGGACA GTTTGGAACG
CCGCGCGCGA TGACGGGCGC TGAAATCGAA AATGTTATCC GCCGCTTCGC ATTCGCGGCC
ACTGTCGCCC GCGACACCGG CTTCACCGGC ATTCAGGTGC ATGGCGCGCA TGGCTACCTG
ATTTCCGAAT TCCTCTCACC TGATGTGAAT GTCCGCACCG ATGAATGGGG TGGCAGTCTG
GAAAATCGTG CACGCCTTCT GCTGGAGGTA GTGCGTGCGA TACGCGCCGC TGTCGGCGCC
GACTTCCCCA TCTCCGTGAA ACTCAATTCC GCCGACTTCC AGCGCGGCGG CTTCAGCCAT
GAAGATGCGA TCCGGGTTGC GGCATGGCTC AACGCCGAGG GTCTCGACTT GCTGGAAATT
TCCGGCGGCA CCTATGAGCA GCCGCGCCTG GTAGGCCTCG ACGATATGAC GCTTCATCCG
GAGAAATCCG AAACGCGCAA GGAAAGCACG ATAGCGCGCG AGGCCTACTT CCTCGAATAT
GCGAAAGACA TCCGCGCCGC GGTAACGATG CCGCTGATGG TCACCGGTGG CTTCAGGACG
CTGGCAGGCA TGAACGCTGC CTTGAAATCC GGCACTATCG ACGTCGTCGG CCTCGCGCGC
CCCCTCTGCG TCGACCCGGC CATTCCCGCC ATGCTTCTCT CCGGCGCCGC ACAGGCAACA
CCCGCCTATG AAAAGACGCT CCGCATCGGT CCGGGCATTC TGGGTCCGCA CAGCCGGTTC
AATCTCGTCA AGGCGATGAA TGGCTGGGGA CAGCAGGGCT GGTTCTGCCT GCAGCTTCTG
CGCATGGGGG AGGGCAAGGA CCCCGACCCC AAGATGGGCG TCTTCTCCGC TTTCAGGAAC
TACGCGAAGA ATGAGGCAAA GACCGCCGCC GCGCTTCAGC GCCAGTAA
 
Protein sequence
MFDNVDISSP LTLPCGATLK NRIAKGAMTE GLGDSLNRAT EGHARLYRRW AEGGAGMLLT 
GNVQIDRRCM ERPGNVAIDG PQSNEAIAAL RNYAKAGTVN DTHLWMQISH AGRQTPASVN
KEPLAPSATP LAMPGGQFGT PRAMTGAEIE NVIRRFAFAA TVARDTGFTG IQVHGAHGYL
ISEFLSPDVN VRTDEWGGSL ENRARLLLEV VRAIRAAVGA DFPISVKLNS ADFQRGGFSH
EDAIRVAAWL NAEGLDLLEI SGGTYEQPRL VGLDDMTLHP EKSETRKEST IAREAYFLEY
AKDIRAAVTM PLMVTGGFRT LAGMNAALKS GTIDVVGLAR PLCVDPAIPA MLLSGAAQAT
PAYEKTLRIG PGILGPHSRF NLVKAMNGWG QQGWFCLQLL RMGEGKDPDP KMGVFSAFRN
YAKNEAKTAA ALQRQ