| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3246 |
|---|
| Symbol | |
|---|
| ID | 5456751 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3465851 |
|---|
| End bp | 3467371 |
|---|
| Gene Length | 1521 bp |
|---|
| Protein Length | 506 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640878837 |
|---|
| Product | anion transporter |
|---|
| Protein accession | YP_001414508 |
|---|
| Protein GI | 154253684 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | [TIGR00785] anion transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 0.961342 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGCG TGGAAGGGCA TAAAGTTGGC TTCGGCCGCC GACAGATCGT TGGGTGGCTG
CTCGGCCCGG CCCTGCTTCT GACGACCTTT GTCGTTCCCG CCCCTGAGGG CTTGAGCCAG
CTCGGCTGGC ACACAGCCGG TGTAGCCGCC TTGATGGCCG TCTGGTGGAT TTCGGAACCG
ATCCCCATTC CGGCGACGTC GCTCCTGCCG ATGATCCTGT TCCCGCTCAT GGGCATCGTC
GACATTCGTG CCGCCGCCGC GCCCTATGCC CATCCGATCA TCTATCTCTT CTTCGGCGGC
TTTCTCCTCG CACTGGCGAT GGAGCGCTGG AACCTGCATC GGCGGATCGC GCTTGGCCTG
ATTGCCTTCA TGGGAACGAA GCCGACGCAC ATAGTCGCCG GTTTCATGGT TGCGGCAGCG
TTTCTCAGCA TGTGGGTCAG CAACACGGCA ACGGCGTTGA TGATGTTGCC CATCGCGCTT
TCGGTCATCG GACTCGTGGA CGCGCAGGCC CGGGAGGAAA AAGCCAAGGC GGCCGCCGCT
GTCTTTTCCA TGGTTCTGCT TCTTGCCGTT GCTTACAGCG CAACCATCGG CGGTCTGGGC
ACGCTGATAG GTACGCCGCC GAACGCGCTT CTCGCGGCCT TCCTCAGCCA GACCTACGGC
TTTCACATCG GCTTCGGACA ATGGATGCTT GTCGGCGTGC CCGTGGTCAT CGTCGGCGTG
CCGCTCGCCT GGTTCCTGCT GACGCGGGTG ATCTTCAAGC TGTCGTCCCT CGACCTGCCT
GGCGCGGCAG GCATAATCGC CTCCGAACGC GCGAAGATCG GCTCTATCAC GCGCCCCGAA
ATCGCCGTCG CCATCATCTT CTCGCTGACG GCCCTCGGCT GGGTTACGCA GCCTCTGATA
GCGCAGGTGT TGCCCTTCGT GTCGGACACA GGCATCGCGC TTCTCGGCGG CCTCCTGCTG
TTCCTCACGC CGGTTGATGC GCGCAAGGGT GTCTTCCTGA TGGACTGGCA GACCGCCAAA
CGTGCGCCTT GGGATGTCTT CCTGCTCTTC GGCGGCGGCC TCAGCCTCGC CGCAGGCATA
GAGGCGCATG GTGTCGCGGC ATATCTCGGC ACCCTGTTCG ATGGTGCAGG CGGAATGCCG
ACCCTGCTTC TGGTTGCGCT CATCTGCGGC ATGATCCTGA TGCTGACCGA ACTCACCAGC
AACACGGCAA CGGCCGCAAC CTTCCTGCCC GTCATCGCGG CGGTCGCCAT CTTTATCGGC
CAGAACCCGC TGCTCCTTCT CGTTCCGGCC GCCATGGCAG CCAATTGTTC TTTCATGATG
CCGGTCGGCA CGCCGCCCAA CGCCATCGTC TTCGGAAGCG GCCGGATCAC CCTGCCGCAA
ATGGCCAAAG CGGGCTGGTG GCTCAACGTC GCCTTCGTGC TTCTGATTGT CGGAATGGTC
TATGTCATTG GCCCGCTCGT CTTCGAAATC GAACCGGGCG TGTTGCCGGA CTGGGCGCGC
AGCCCGGCTG GGGCGTCATA G
|
|---|
| Protein sequence | MESVEGHKVG FGRRQIVGWL LGPALLLTTF VVPAPEGLSQ LGWHTAGVAA LMAVWWISEP
IPIPATSLLP MILFPLMGIV DIRAAAAPYA HPIIYLFFGG FLLALAMERW NLHRRIALGL
IAFMGTKPTH IVAGFMVAAA FLSMWVSNTA TALMMLPIAL SVIGLVDAQA REEKAKAAAA
VFSMVLLLAV AYSATIGGLG TLIGTPPNAL LAAFLSQTYG FHIGFGQWML VGVPVVIVGV
PLAWFLLTRV IFKLSSLDLP GAAGIIASER AKIGSITRPE IAVAIIFSLT ALGWVTQPLI
AQVLPFVSDT GIALLGGLLL FLTPVDARKG VFLMDWQTAK RAPWDVFLLF GGGLSLAAGI
EAHGVAAYLG TLFDGAGGMP TLLLVALICG MILMLTELTS NTATAATFLP VIAAVAIFIG
QNPLLLLVPA AMAANCSFMM PVGTPPNAIV FGSGRITLPQ MAKAGWWLNV AFVLLIVGMV
YVIGPLVFEI EPGVLPDWAR SPAGAS
|
|---|
| |