Gene Plav_3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3245 
Symbol 
ID5456654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3465305 
End bp3465856 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content59% 
IMG OID640878836 
Producthypothetical protein 
Protein accessionYP_001414507 
Protein GI154253683 
COG category[R] General function prediction only 
COG ID[COG3911] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.865023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGACCT ATAGGCCTAA CTTCTTTGTC GTCACTGGCG GCCCGGGCGC CGGCAAGACG 
AGCCTGATAA ATGCGCTTGC CGATTACGGC CACCTCCATG TCGAAGAGGC CGGGCGCAGG
ATCATCCGTG AACAGAAGCT GTCAGGCGGC AACGCGACGC ATGATGGCGA CAGGGTCGCC
TATCGCGAGC TGATGTTCGA GCATGCAATC GAGAGCTATC GGAGGATGAC TACCGAGACG
AGTGTCGTCT TCTTCGACCG GGGGTTTCCG GATCTCGCCG GTTACAGCCG CCTGATCGGG
GAGAGCGTGC CACCGGATAT CGAGCGCGCG ATTGCACTTC AGCGGTACAA CAACCTGGTC
TTCATCGCAC CTCCATGGAA GGATATCTAT GCGGCCGACA CCGAGCGGCG GCAGGATTTT
GCCGAGGGCG TCACCACACA CGATGCGATC CGCGATGCCT ACCAGCAGGC GGGTTACGAG
CTAATCGAAT TGCCTAAAGC AAGTATCGAG AGCCGTGTGG ATTTCGTGCT TGCGCGAGCA
AATACGCTAT GA
 
Protein sequence
MKTYRPNFFV VTGGPGAGKT SLINALADYG HLHVEEAGRR IIREQKLSGG NATHDGDRVA 
YRELMFEHAI ESYRRMTTET SVVFFDRGFP DLAGYSRLIG ESVPPDIERA IALQRYNNLV
FIAPPWKDIY AADTERRQDF AEGVTTHDAI RDAYQQAGYE LIELPKASIE SRVDFVLARA
NTL