Gene Plav_3244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3244 
Symbol 
ID5456377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3463280 
End bp3464686 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content60% 
IMG OID640878835 
Productglutamine synthetase, type I 
Protein accessionYP_001414506 
Protein GI154253682 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.877746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA AATCCATTCA GCAAATCATC AAAGAAAAGG ACGTCAAGTA CGTTGACCTG 
CGCTTTACCG ATCCGCGCGG CAAGATGCAG CATGTGACGT TCGATATCGG CTTCTGCGAC
GATGACTTTT TCGCGGAAGG CACGATGTTC GACGGCTCGT CGATCGCGGG CTGGAAGGCC
ATCAACGAGT CGGACATGGT TCTTCTTCCC GATCCGAAGA CCGCGACGAT CGACCCGTTT
TATGCGCAGA CGACGCTTGC GGTTTTCTGC GACATTCTCG AACCGTCCAC CGGCGAAATT
TATGCTCGCG ATCCTCGCGG CACGGCGAAG CTTGCCGAGG CATATCTGAA GTCCACCGGC
ATCGGCGACA CGATCGTGTT CGGCCCGGAA GCCGAATTCT TCATCTTCGA CGACGTGAAG
TTTTCGACCT CCCCCTACAA GACGGGCTTT GAAGTCGACT CCGTCGAGCT GCCGACCAAC
AGCGACACGC ACTACGAAAC GGGCAACCTC GGCCACCGTC CGCGCACCAA GGGCGGCTAC
TTCCCGGCCA ACCCGATCGA CTCCTGCCAG GACCTCCGCG GCGAAATGCT GACGGTCATG
GAAGAGATGG GCGTCAAGAT CGAGAAGCAT CACCACGAAG TTGCCGCCGC CCAGCACGAA
CTTGGAACGA AGTTCCAGAC GCTGACCACG GCTGCCGACC ACATGCAGAT CTACAAGTAT
GTGATCCACA ACGTGGCGCA GGCGTTCGGC AAGTCGGCAA CCTTCATGCC GAAGCCGGTG
TTCGGCGACA ACGGTTCGGG CATGCATTGC CACCAGTCGA TCTGGAAGGA CGGCAAGCCG
CTCTTCGCCG GCAACAAGTA TGCCGACCTC AGCCAGGAAT GCCTGTGGTA CATCGGCGGC
ATCCTGAAGC ACGCGAAGGC GCTGAACGCT TTCACCAACC CGTCCACGAA CAGCTACAAG
CGCCTCGTGC CGGGCTATGA AGCGCCGGTG CTGCTCGCCT ATTCGGCGCG CAACCGCTCG
GCCTCCTGCC GTATTCCGCA CGGCACGTCG CCGAAGTCGA AGCGCATCGA AATCCGCTTC
CCCGATCCGA CGGCGAACCC CTATCTCGCT TTCGCGGCGA TGCTGATGGC TGGCCTCGAC
GGGATCGAGA ACAAGATCGA TCCGGGCGGT CCGATGGACA AGAACCTCTA CGACCTGCCG
CCGGACGAGC TGAAGGAAAT CCCGACGGTT TGCGGTTCGC TGCGCGAGGC GCTGATTGCC
GTGGACGCCG ACCGCAAGTT CCTGACCAAG GGCAACGTTT TCACCGACGA CCAGATCGAC
GCCTATCTGG AACTGAAGTG GGAAGAATGC ATGCGTTACG AAATGACGCC GCATCCGGTC
GAGTACGATA TGTACTACTC GGTCTAA
 
Protein sequence
MADKSIQQII KEKDVKYVDL RFTDPRGKMQ HVTFDIGFCD DDFFAEGTMF DGSSIAGWKA 
INESDMVLLP DPKTATIDPF YAQTTLAVFC DILEPSTGEI YARDPRGTAK LAEAYLKSTG
IGDTIVFGPE AEFFIFDDVK FSTSPYKTGF EVDSVELPTN SDTHYETGNL GHRPRTKGGY
FPANPIDSCQ DLRGEMLTVM EEMGVKIEKH HHEVAAAQHE LGTKFQTLTT AADHMQIYKY
VIHNVAQAFG KSATFMPKPV FGDNGSGMHC HQSIWKDGKP LFAGNKYADL SQECLWYIGG
ILKHAKALNA FTNPSTNSYK RLVPGYEAPV LLAYSARNRS ASCRIPHGTS PKSKRIEIRF
PDPTANPYLA FAAMLMAGLD GIENKIDPGG PMDKNLYDLP PDELKEIPTV CGSLREALIA
VDADRKFLTK GNVFTDDQID AYLELKWEEC MRYEMTPHPV EYDMYYSV