Gene Plav_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3243 
Symbol 
ID5456065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3462816 
End bp3463154 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content57% 
IMG OID640878834 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001414505 
Protein GI154253681 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.669306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.422234 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA TCGAGGCGAT CATCAAGCCG TTCAAGCTCG ACGAAGTGAA AGAGGCGCTG 
CAGGAAGTGG GGCTGCAAGG CATTACCGTT ACCGAGGCAA AAGGTTTCGG GCGTCAGAAG
GGGCACACCG AGCTCTATCG CGGCGCCGAA TATGTCGTCG ACTTTCTGCC CAAAGTAAAA
ATCGAAGTCG TGCTCAACGA CGAGATGGTG GCAAAGGCCG TGGAAGCCAT CCAGCAGGCC
GCTCGCACGG GCCGCATCGG CGACGGCAAG ATTTTCATCT CCAACATCGA AGAGTCCATC
CGCATCCGTA CCGGCGAAAC GGGCGTGGAG GCAATCTAA
 
Protein sequence
MKKIEAIIKP FKLDEVKEAL QEVGLQGITV TEAKGFGRQK GHTELYRGAE YVVDFLPKVK 
IEVVLNDEMV AKAVEAIQQA ARTGRIGDGK IFISNIEESI RIRTGETGVE AI