| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3241 |
|---|
| Symbol | |
|---|
| ID | 5454706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3460648 |
|---|
| End bp | 3461316 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640878832 |
|---|
| Product | phospholipase/carboxylesterase |
|---|
| Protein accession | YP_001414503 |
|---|
| Protein GI | 154253679 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0400] Predicted esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 0.774909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.296389 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTCA CCGCCCACCG CCGCTCCGCC GCCTCCGGCA AGGCGGAATG GCTTGTCGTT
TTCCTTCACG GCTACGGTTC CGCAGGCGCA GAACTTATGA GCTTCGCCGA CTACTGGCAG
TCCTCCATGC CGAACGTCGC CTTCGTCGCG CCGGATGGTC CGCAGGCCAC GAAAGACGGC
GGCTTTCAAT GGATCGGCAA ACGCCCCGGC ACCGATCCGC GCCTCTATGA CGACGCGGTG
GAAGCCGCGC CCCTTCTCCA CACCTTCATC GACGCCGAAC TTGCGCGCGA AAATCTCGGG
CCGGACCGCC TCACGCTTGT CGGATTCAGC CAGGGAACAG TGATGGCACT GCATCTCGGC
CTCCGCCGCG CCGCGGCCCC CGCTGCCGTG CTCGGCTACT CCGGCGGTCT CGTCGGTGCC
GACAAGCTGA AAGACGAAAT CGCCTCGAAG CCGCCCGTCA TGCTGGTCCA TGGCGAACAG
GATGCGCTCG CGCCGGTCTA CGGCATGATG GCCTCGGTAA AGGCGCTTTC GGCCGCAGGA
ATTGTTTGCC AGGGCGTGCC GCTCCCGAAC CTCGGCCACG AGGTCAATGC CGACGCCCTC
ATCTACGGCG CACGCTTCCT CCTCTCCGCC TTTGCTTTCC GCCAGAAGCA CGGCGTGCCG
GAAAGCTGA
|
|---|
| Protein sequence | MTLTAHRRSA ASGKAEWLVV FLHGYGSAGA ELMSFADYWQ SSMPNVAFVA PDGPQATKDG
GFQWIGKRPG TDPRLYDDAV EAAPLLHTFI DAELARENLG PDRLTLVGFS QGTVMALHLG
LRRAAAPAAV LGYSGGLVGA DKLKDEIASK PPVMLVHGEQ DALAPVYGMM ASVKALSAAG
IVCQGVPLPN LGHEVNADAL IYGARFLLSA FAFRQKHGVP ES
|
|---|
| |