| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3236 |
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| Symbol | |
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| ID | 5454739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3455535 |
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| End bp | 3457067 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640878827 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001414498 |
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| Protein GI | 154253674 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.358876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.593017 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAT CGCGTGGCTA TAGTGGCGCC ATGATGGCCA CTTCCGATTC GTCCGCTCTT
CTCACCGTCG CCGAGATGGG CCGCGCCGAC GCGCTGACCA TCGAACGCGG CACGCCCGGC
ACGGCCCTTA TGGAAAACGC CGGCCGCGCC GTCGCAGAGG CGATTGTCGC GCGCTTCCCT
CAGGGCCCTG TCTCCGTTCT CTGCGGTCCC GGCAATAATG GCGGTGATGG CTTTGTCGTC
GCGCGCCTGC TGGCGGAGGA GGGCTGGCCG GTTTCGCTCT TCCTTCTCGG CGGCCGCGAT
CGTTTGAAGG GCGACGCAGC CGAAGCGGCA AACCGCTGGC CGGGAGCTGT CCATCCGCTG
TCGGCGGATG CCGGACATGG TGCTTCCCTG GTCGTCGACG CGATCTTCGG CGCTGGCCTA
TCAAAAGAAG TATCGGGCAT TGCCGCCGAC GCAATAGCGC GTATCGCCGA ACGGCAAACG
CCCGTCGTCG CCGTCGATAT TCCGACGGGT ATTGATGGAG ATACGGGGCA GGTAAGGGGC
GCTGCTTTCG ATGCCGCGCT CACCGTGACT TTCTTCCGCG CCAAGCCGGG TCATCTTCTG
CTCCCCGGCC GCCTTCATTG CGGCGAGTTG CAGGTGGCCG ATATCGGCAT CGCGCCGGAT
GTACTCGACG AGATTGCCCC GCAAACATTC ATCGACAAGC CGCAGCTCTG GTCGTCATCC
TTTCCCCGTC CGCGCCTCGA CAGCCACAAA TACACACGCG GCCATGCCGT CGTCGTCTCG
GGCGGTGCCT CGCATACAGG CGCGGCCCGT CTCGCCGCGC GCGGCGCGTT GAGGGCCGGC
GCTGGGCTTG TCACACTCGC CTCGCCGCCA TCCGCGCTCC TCGTCAATGC GGCGCATCTG
ACATCGGTCA TGCTCCAGCC CTTCGATGGT GCCGACGCTC TCACGACGAT CCTTGAGGAC
AAGCGCAAGA ACGCGCTGCT CATCGGCCCC GGCGCGGGAA TCGGCGCCCA CACGCGCGAA
AATGTGCTGG CCGCGCTCCT CTCCGGCGCG GCCATGGTGC TGGACGCGGA CGCGCTCACC
TCCTTCGCCG AAATCCCGCG CGACCTCTTC GTTGCCATTG CGGGCTACTT CGCGGGTCCC
GTCGTCATGA CGCCCCACGA GGGCGAGTTC GGGCGTCTCT TCCCCCGGAT AGCCGAGGGG
GAGGGGAGCA AGCTTGCCCG CGCCCGGGCC GCCGCTGCCG AGGCGTCAGC CATCATCGTG
CTCAAGGGCG CCGACACGGT CGTCGCCGCG CCGGACGGCC GGGCCGCCAT TGCCATGAAT
GGTGGTCCCG AGCTTGCTAC CGCCGGGTCT GGCGATGTGC TGGGGGGCAT CATTCTCGGC
CTCCTGGCTC AGGCCATGCC CCCCTTCGAG GCGGCATGCG CAGGCGTCTG GCTCCATGGC
GAGGCCGGCT CCTGCTTCGG CCCCGGCCTC ATCTCCGAGG ATCTGCCCGA GATGCTGCCT
GCCGTTCTGA GGGATCTTCT CCCGGTCTTG TGA
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| Protein sequence | MPQSRGYSGA MMATSDSSAL LTVAEMGRAD ALTIERGTPG TALMENAGRA VAEAIVARFP
QGPVSVLCGP GNNGGDGFVV ARLLAEEGWP VSLFLLGGRD RLKGDAAEAA NRWPGAVHPL
SADAGHGASL VVDAIFGAGL SKEVSGIAAD AIARIAERQT PVVAVDIPTG IDGDTGQVRG
AAFDAALTVT FFRAKPGHLL LPGRLHCGEL QVADIGIAPD VLDEIAPQTF IDKPQLWSSS
FPRPRLDSHK YTRGHAVVVS GGASHTGAAR LAARGALRAG AGLVTLASPP SALLVNAAHL
TSVMLQPFDG ADALTTILED KRKNALLIGP GAGIGAHTRE NVLAALLSGA AMVLDADALT
SFAEIPRDLF VAIAGYFAGP VVMTPHEGEF GRLFPRIAEG EGSKLARARA AAAEASAIIV
LKGADTVVAA PDGRAAIAMN GGPELATAGS GDVLGGIILG LLAQAMPPFE AACAGVWLHG
EAGSCFGPGL ISEDLPEMLP AVLRDLLPVL
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