Gene Plav_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3233 
Symbol 
ID5453932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3451544 
End bp3452110 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content68% 
IMG OID640878823 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001414495 
Protein GI154253671 
COG category[R] General function prediction only 
COG ID[COG3153] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.137792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.834458 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA ACCGGCTCGC GCCGTCCACC TTGGAAACGC CGATGAAGAT CGTTGTTGAA 
TCTGGCTCAC CCACGCCGCA GGTCGAAAGC CTGGTCGCGG ACGCCTTCGG CCCCGACCGC
TTCGCAAAAG CCGTCTACCG GCTCCGGGAC GGCGTCGATG CCGAGGCATC GCTTTCCCTG
GTTGCCATCG ACAAGGGCAA GGTTGTCGGA ACGCTCCGCT TCTGGCCGGT GGAAATCGCC
GGTCAAGTAC CGGCTCTCCT GCTGGGTCCC CTTGTCACCT GCCCGGAGCG GCAGGGCGAG
GGCATCGGCA GCAAGCTCAT GCATGAAGGC CTTGCCCGTG CGGCGGCTCA GGGGCATCGG
ATCGTGGTGT TGGTGGGGGA TGAACCCTAC TACCGCCGTT TCGGCTTCCA CCGGGCCCTG
GCGCGCCGCC TGGAGCTGCC TGGCTGGGTC GATCCGGCCC GATTCCTCGC CCGCGAGCTG
GCCGCAGGGG CCCTTGCGGG TGTTGGCGGC ATGATTGGCC GGCCGGCCGG TGCAGAGCGT
GAACAGAAGG CCGGAAGGGC CGCCTGA
 
Protein sequence
MNANRLAPST LETPMKIVVE SGSPTPQVES LVADAFGPDR FAKAVYRLRD GVDAEASLSL 
VAIDKGKVVG TLRFWPVEIA GQVPALLLGP LVTCPERQGE GIGSKLMHEG LARAAAQGHR
IVVLVGDEPY YRRFGFHRAL ARRLELPGWV DPARFLAREL AAGALAGVGG MIGRPAGAER
EQKAGRAA