| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3232 |
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| Symbol | |
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| ID | 5454063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3450688 |
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| End bp | 3451329 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640878822 |
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| Product | endopeptidase Clp |
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| Protein accession | YP_001414494 |
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| Protein GI | 154253670 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.124427 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGACC CCATCGAAAC CTACATGAAC CTCGTACCGA TGGTGGTCGA GCAGACCAAT
CGTGGCGAGC GGGCATACGA TATCTTCTCG CGCCTGCTGA AGGAGCACAT CATTTTCGTT
GCCGGTCCCG TCGAGGACGG AATGGCGATG CTTGTTACCG CTCAGCTTCT CTTTCTCGAG
GCCGAGAATC CGAAAAAGGA AATCTCGATG TACATCAACT CGCCGGGTGG CGTGGTGACA
TCGGGCCTTG CGATCTACGA CACCATGCAG CACATCCGCC CCCCCGTTTC GACGGTTTGC
ATGGGGCAGG CGGCTTCGAT GGGGTCGCTG CTTCTCGCTG CCGGTGAAAA GGGCATGCGC
TTCGCTCTGC CGAACGCGCG GATTATGGTC CATCAGCCGT CGGGTGGTTT TCAGGGCCAG
GCGAGCGACA TCGAGATTCA TGCGCGCGAA ACGATCGCGA TTCGCGAACG GCTAAACAAT
ATCTACTGCA AACACACCGG CCAGAGCCTC AAGGCGGTTG AAGACGCGCT GGAGCGCGAC
AACTTCATGA GCCCCGAGCG TGCTTTGGAA TTCGGAATTA TCGACCACGT CGGGGTGGAT
CGTCCGCCGC TATCCGGTTC GGAAGGCGCC AAAAAAGGCT GA
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| Protein sequence | MKDPIETYMN LVPMVVEQTN RGERAYDIFS RLLKEHIIFV AGPVEDGMAM LVTAQLLFLE
AENPKKEISM YINSPGGVVT SGLAIYDTMQ HIRPPVSTVC MGQAASMGSL LLAAGEKGMR
FALPNARIMV HQPSGGFQGQ ASDIEIHARE TIAIRERLNN IYCKHTGQSL KAVEDALERD
NFMSPERALE FGIIDHVGVD RPPLSGSEGA KKG
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