| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3228 |
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| Symbol | |
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| ID | 5455093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3444535 |
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| End bp | 3445818 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878818 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001414490 |
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| Protein GI | 154253666 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCCGCA CCCTTGCACC CGTTTTTTCC CTGTTGCTGG CTACGGCAAT CCTGCTGATC
GGCAATGGCC TGCTTGGCAC GCTCATACCG ATTCGCGCCG GCATAGACGG TTTCGCCATA
ACGACCGTGG GCGTGATCGG CAGCGTCTAT TTCGCGGGCT TTCTGGTCGG CTGCATGGCG
ACGCCGCATG TGGTGCATCG GGCAGGACAC ATCAGAAGCT TTGCGGCCTT TTGCGGCCTC
GCATCCGTCG CGCCGCTGAT TCACGCACTT TCTTCAGATC CGTTCATTTG GGGCCTCATG
CGCATCCTGA CGGGTTTCTG CTTCGCGGGG CTCTACATGG TGATCGAGAG CTGGCTGAAC
GAGCAGTCCA CGAATGAGAC GCGCGGGCGC TTCTTTTCCA CCTATGTGAT CGTGAACCTG
TCGGCGCTGA CTGTCGGGCA GTTCATGCTC AACGCGGCGG ACCCGGGCGG CTTTGCCCTT
TTCGCCGTGT GCTCGATCCT CACTTCGCTG GCGCTGGTGC CCGTAGCCCT TACAACGTCA
GTGCAGCCGA TGCCCATCCA GAGCACGCGG ATCGATGTCT GGAAGCTCTA TGCACTGTCT
CCCGTGGGCT TGATAGGGTC GTTCGTGGTT GGCCTTACCA ATGCACCGTT CTGGACGCTG
GCGCCCCTCT ATGCGAGCGA GAGCGGCCTC GACATGAGCG GCATTTCGCT TTTCATGGCA
GCGGCCATCA TCGGCGGGGC GATAGCGCAG TGGCCGATCG GGCGGCTTTC GGACCAAATG
GACCGCCGGC GGGTCATAGT CGTCGTCAGC ATCGGCGCGG CACTGGGCGA GATTGCCCTG
GTGATCGCTG GGAGCGGCGG CAGCGTGACG GCGGTGATGC TGGCAGGCTT CCTGTTTGGT
GTGTTCGGCC TGACGCTCTA TTCGGTCTGT GTGGCCCATA TGAACGACCA TGGGCAGAGC
GAAAGTTTCG TGGCGATATC GGGGGGGCTG CTGATCGTCT TTTCCATTGG GTCGATCATC
GGCCCGACGG TGGCGTCCAT CGGCGTTTCG ACTTTCGGCA TTGCCTCCAT TTTCCTGGTA
ACGGCGACAG TTCACCTGCT TTTTGCGGCG TATACCGGCT ACCGGATCAC TTCTGCCCCT
GCGCTGACCG GGGAGCAGCG CAGCGACTTC GTCGCGGTGC CTTTTACCCA GGTGCAGCCG
CTGCCGACAG AGCTCGACCC GCGGGCCTCG GACGAAGCTC TGGCGCCGGA AGAGGCGAGC
GAGACGGACG CAACGGCACG TTGA
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| Protein sequence | MPRTLAPVFS LLLATAILLI GNGLLGTLIP IRAGIDGFAI TTVGVIGSVY FAGFLVGCMA
TPHVVHRAGH IRSFAAFCGL ASVAPLIHAL SSDPFIWGLM RILTGFCFAG LYMVIESWLN
EQSTNETRGR FFSTYVIVNL SALTVGQFML NAADPGGFAL FAVCSILTSL ALVPVALTTS
VQPMPIQSTR IDVWKLYALS PVGLIGSFVV GLTNAPFWTL APLYASESGL DMSGISLFMA
AAIIGGAIAQ WPIGRLSDQM DRRRVIVVVS IGAALGEIAL VIAGSGGSVT AVMLAGFLFG
VFGLTLYSVC VAHMNDHGQS ESFVAISGGL LIVFSIGSII GPTVASIGVS TFGIASIFLV
TATVHLLFAA YTGYRITSAP ALTGEQRSDF VAVPFTQVQP LPTELDPRAS DEALAPEEAS
ETDATAR
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