| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3225 |
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| Symbol | |
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| ID | 5453450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3442905 |
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| End bp | 3443480 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878814 |
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| Product | NADH-quinone oxidoreductase, B subunit |
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| Protein accession | YP_001414488 |
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| Protein GI | 154253664 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01957] NADH-quinone oxidoreductase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.11443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.943012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTGA CGAACCCCGA CAAGGTAATC TCCAACACGC CGGGCGTGGT CGATCCCGCT
ACGTCGGTTC CGGCTTGGCA GGATGATGCT TTTTTCCGTC AGGCGACGGA CCAGCTTGCC
GACAAGGGCT TTGTGCTGAC GACGGTTGAT GATCTCATCA ACTGGTCGCG CACCGGCTCG
CTGATGTGGA TGACCTTCGG TCTCGCCTGC TGCGCGGTCG AGATGATGCA GACCTCGATG
CCTCGCTACG ATGCCGAACG CTTCGGTGTC GCGCCCCGCG CCAGTCCGCG CCAGTCCGAC
GTGATGATCG TCGCCGGCAC CTTGACGAAC AAGATGGCGC CGGCGCTGCG CAAGGTCTAT
GACCAGATGC CGGAGCCGCG CTATGTGATC TCGATGGGGT CATGTGCGAA TGGCGGCGGT
TACTACCACT ACTCCTATTC CGTGGTGCGC GGCTGCGACC GGATCGTCCC GGTCGACATC
TACGTGCCCG GCTGTCCTCC CACCGCCGAG GCGCTGCTTT ACGGCATCCT GGCGCTTCAG
AAGAAGATCC GTCGGACGGG TACGCTCGAC CGCTGA
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| Protein sequence | MGVTNPDKVI SNTPGVVDPA TSVPAWQDDA FFRQATDQLA DKGFVLTTVD DLINWSRTGS
LMWMTFGLAC CAVEMMQTSM PRYDAERFGV APRASPRQSD VMIVAGTLTN KMAPALRKVY
DQMPEPRYVI SMGSCANGGG YYHYSYSVVR GCDRIVPVDI YVPGCPPTAE ALLYGILALQ
KKIRRTGTLD R
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