| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3224 |
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| Symbol | |
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| ID | 5454001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3442232 |
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| End bp | 3442834 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640878813 |
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| Product | NADH dehydrogenase subunit C |
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| Protein accession | YP_001414487 |
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| Protein GI | 154253663 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
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| TIGRFAM ID | [TIGR01961] NADH (or F420H2) dehydrogenase, subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0405196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.943012 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACGAAA GTCTTGCAGA ACTGGGCGAA CACATTCTTG GCACGCTCGA AGAGTCCGTG
TTGGGATTTC ACGTCGCTTT CGGCGAACTC AACGTTCTGG CTCAGGCCCA GTCGATCGCA
CGGGTCCTGA AGTTCCTGCG CGATGACCCC GCCTGCCGCT TCGGAACGCT TCTGGACATC
ACGGCCGTCG ACTACCCGCA ACGTCCGGAG CGGTTCGACG TCGTCTATCA TCTCCTGTCG
ATGCACCAGA ACCAGCGCAT CCGCGTAACG GTCCGCACCA ACGAGGAAAC CGCAGTGCCG
AGCGTGGTCG CGGTTTATCC CTCCGCTAAC TGGTATGAGC GTGAAACCTT CGACATGTAC
GGGGTGCTCT TTTCCGATCA TCCGGACCTT CGCCGCATCC TCACGGACTA TGGTTTCAAC
GGCTATCCGC TCCGCAAGGA TTTTCCCCTT ACCGGCTATG TCGAAGTGCG CTACGACGAC
GACGAGAAGC GTGTGGTCTA CGAGCCGGTG AAGCTGGTGC AGGAGTTCCG CAACTTCGAT
TTCATGAGCC CTTGGGAAGG CGCGGAATAC CTGCTGCCGG GCGATGAGAA GGCGGAGCAC
TAG
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| Protein sequence | MDESLAELGE HILGTLEESV LGFHVAFGEL NVLAQAQSIA RVLKFLRDDP ACRFGTLLDI
TAVDYPQRPE RFDVVYHLLS MHQNQRIRVT VRTNEETAVP SVVAVYPSAN WYERETFDMY
GVLFSDHPDL RRILTDYGFN GYPLRKDFPL TGYVEVRYDD DEKRVVYEPV KLVQEFRNFD
FMSPWEGAEY LLPGDEKAEH
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