| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3223 |
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| Symbol | |
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| ID | 5453987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3441050 |
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| End bp | 3442228 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878812 |
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| Product | NADH dehydrogenase I, D subunit |
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| Protein accession | YP_001414486 |
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| Protein GI | 154253662 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
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| TIGRFAM ID | [TIGR01962] NADH dehydrogenase I, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0966966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAAC AGGAACTCCG CAATTATCAC CTGAATTTCG GTCCGCAGCA TCCGGCCGCG
CATGGTGTGC TGCGCCTCGT GCTGGAGCTC GATGGCGAAG TCGTCGAGCG CGTGGACCCG
CATATCGGTC TTCTGCACCG TGGCACGGAA AAGCTGATCG AGTACAAGAC CTATCTTCAG
GCGACCCCAT ACTTCGACCG GCTCGATTAC GTTGCGCCGA TGAACCAGGA GCACGCCTTC
GTGCTTGCCG CCGAGCGTTT GCTTGGCCTC GAGGTGCCGC GCCGCGCCCA GTTCATCCGC
GTCCTCTATT CCGAGATCGG CCGCATCCTC GCGCATTTGC TCAACGTAAC GACGCAGGCG
ATGGACGTCG GCGCGCTCAC CCCGCCGCTT TGGGGCTTTG AAGAACGCGA AAAGCTCATG
ATCTTTTATG AGCGTGCGTC CGGAGCCCGC CTTCACGCAA ATTATTTCCG CACGGGCGGT
GTGCATCGCG ACCTGCCGCC AAAGCTGCTC GAGGATATCT ACAATTTTTG CGACCCGTGT
TCGCAGGTGC TGGACGATCT CGAAGGTCTC ATCACCGACA ACCGCATCTT CAAGCAGCGC
AACGTCGACA TCGGCGTCGT CTCGCAGGAA GAGGCGCTGG AGTGGGGCTT CTCCGGCGTC
ATGGTGCGCG GCTCAGGCAT GGCCTGGGAC CTGCGCCGCG CGCAGCCCTA TGAGGTTTAT
TCCGAACTCG ATTTCGACAT TCCCGTAGGC AAGAACGGCG ACTGCTACGA TCGCTATCTC
TGCCGCATGG AAGAAATGCG CCAGTCCTTG CGCATCATGA AGCAGTGCAT CGAGTTGATG
CCGGGTGGTC CTGTGCATGT GCTCGATGGC AAGGTCGTGC CGCCGTCGCG CAGCGAGATG
AAGCGCTCGA TGGAAGCGCT TATTCATCAC TTCAAGCTTT ATACCGAGGG CTACCACGTG
CCCGCCGGCG AGGTTTATGC CGCCGTCGAA GCGCCCAAGG GCGAGTTCGG CGTCTACCTC
GTGTCGGATG GTGGTAATAA GCCTTACAAG TGCAAGATCC GTGCTCCCGG CTACGCGCAT
CTTCAGGCCA TGGACCATCT CTGCAAGGGT CACATGCTTG CGGACGTATC GGCCATTCTC
GGTTCTATCG ACATCGTTTT CGGAGAGGTG GACCGGTGA
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| Protein sequence | MAEQELRNYH LNFGPQHPAA HGVLRLVLEL DGEVVERVDP HIGLLHRGTE KLIEYKTYLQ
ATPYFDRLDY VAPMNQEHAF VLAAERLLGL EVPRRAQFIR VLYSEIGRIL AHLLNVTTQA
MDVGALTPPL WGFEEREKLM IFYERASGAR LHANYFRTGG VHRDLPPKLL EDIYNFCDPC
SQVLDDLEGL ITDNRIFKQR NVDIGVVSQE EALEWGFSGV MVRGSGMAWD LRRAQPYEVY
SELDFDIPVG KNGDCYDRYL CRMEEMRQSL RIMKQCIELM PGGPVHVLDG KVVPPSRSEM
KRSMEALIHH FKLYTEGYHV PAGEVYAAVE APKGEFGVYL VSDGGNKPYK CKIRAPGYAH
LQAMDHLCKG HMLADVSAIL GSIDIVFGEV DR
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