| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3218 |
|---|
| Symbol | |
|---|
| ID | 5454321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3435534 |
|---|
| End bp | 3436025 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640878807 |
|---|
| Product | NADH dehydrogenase subunit I |
|---|
| Protein accession | YP_001414481 |
|---|
| Protein GI | 154253657 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1143] Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) |
|---|
| TIGRFAM ID | [TIGR01971] NADH-quinone oxidoreductase, chain I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGGC TGGATCAGTC GGCGCGGTCG CTCTTCCTCG CCGAGTTTGT GTCGAGCTTC
CTGCTCGCCA TGCGCTATTT CTTCAAGCCC AAGGTGACGC TGAACTATCC CTTCGAGAAG
GGGCCGCTCA GCCCGCGCTT CCGTGGCGAA CATGCGCTGC GCCGCTATCC GAACGGCGAA
GAACGCTGCA TCGCCTGCAA GCTTTGCGAG GCCATTTGCC CCGCGCTCGC CATCACCATC
GAGGCCGGCC CCCGCCGCAA CGACGGTACG CGCCGCACCA CGCGCTACGA CATCGACATG
ACGAAATGCA TCTATTGCGG CCTCTGCCAG GAAGCCTGCC CCGTGGATGC CATCGTCGAA
GGTCCGAATT TCGAATTCGC GACGGAAACG CGCGAAGAGC TGATGTACGA CAAGAACCGG
CTGCTCGCGA ATGGCGACCG CTGGGAACGC GAGATCGCGA AGAACATCGC GCTCGACGCG
CCATACCGAT AA
|
|---|
| Protein sequence | MAWLDQSARS LFLAEFVSSF LLAMRYFFKP KVTLNYPFEK GPLSPRFRGE HALRRYPNGE
ERCIACKLCE AICPALAITI EAGPRRNDGT RRTTRYDIDM TKCIYCGLCQ EACPVDAIVE
GPNFEFATET REELMYDKNR LLANGDRWER EIAKNIALDA PYR
|
|---|
| |