| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3215 |
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| Symbol | |
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| ID | 5453653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3432550 |
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| End bp | 3434481 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878804 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_001414478 |
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| Protein GI | 154253654 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.937058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACTCGG CAATCGTCTT CCTGCCGCTT CTGGGTTTCC TGGTCGCGGG CATTTTCGGG
CGCTGGCTTG GCCCGCGTGG CGCGCAGATC GTCACCTCCG GCCTGCTTGT CATATCGGCC
CTTCTCTCTG TCGCCGCGCT TGTCTCGGTC GGTCTTGGCG GCGAGACTGA GCGCGTCCAG
GTCATGACTT GGATCGACTC CGGCGATTTC GAAGCCGACT GGCGCCTCCG CATCGACACG
CTTACCGCCG TCATGCTCGT CGTCGTCACC TCCGTCTCCG CGCTCGTGCA TATCTATTCG
ATCGGCTACA TGAGCCACGA TCCGCACCAG CCGCGCTTCT TTGCCTATCT CTCGCTCTTC
ACCTTCGCCA TGCTGATGCT GGTCACGGCG GACAATTTCA TCCAGCTCTT CTTCGGCTGG
GAAGGCGTGG GCCTCGCCTC ATATCTCTTG ATCGGCTTCT GGTACCAGCG CCCGAGCGCC
AATGCCGCCG CCATCAAGGC CTTCGTGGTG AACCGCGTCG GCGATTTCGG CCTCATCCTC
GGCATCGCCA CGCTCTTCTT CACCATCGGC TCGGTCGATT TCGACACCGT CTTCAAGGCC
ATCCCGGAAA TCGCGGACAG CACTTTTTCC TTCCTCGGCT ATGATGTGCC TGTGGTCACC
ACCGCCTGCC TCCTGCTCTT CATGGGCGCG ATGGGCAAGT CGGCACAGTT CCTGCTCCAC
ACCTGGTTGC CGGATGCGAT GGAAGGCCCG ACCCCCGTTT CCGCGCTCAT CCATGCCGCG
ACGATGGTCA CGGCCGGCGT CTTCCTGCTC GCCCGCCTGT CACCCATCTT TGAATTCTCG
GCCACGGCGC TCACCTTCGT CACTGTGATC GGCGCAACGA CAGCCTTCTT CGCCGCCACC
GTGGGCCTGG TGCAGAACGA CATCAAGCGC GTCATCGCCT ATTCGACCTG TTCGCAGCTC
GGCTACATGT TCGTGGCCGT CGGCGTCGGC GCCTACGAGG TGGCGATGTT CCACCTCTTC
ACCCACGCCT TCTTCAAGGC GCTGCTGTTC CTCGGTTCCG GCTCCGTCAT CCACGCCATG
AGCGACGAAC AGGACATGCG GAAAATGGGC GGGCTCTACA AGCTCATCCC CGTCACATGG
ATCATGATGG TGATCGGTAC GCTTGCCTTG ACGGGCTTCC CCTTCACCGC GGGCTACTAT
TCCAAGGATG CCGTCATCGA AGCCGCCTAT GCCGGCCACA ACGCCGCGCA TATGTATGCC
TTCACGCTGA CGGTTGCCGC CGCGCTCCTC ACCTCGTTTT ATTCATGGCG CCTGATTTTC
ATGACCTTCC ATGGGACAAG CCGCGCCTCG AACGAAACCC TGAGCCACGT GCACGAGTCG
CCGCTCGTCA TGCTGGTGCC GCTTGTGGTG CTCGCCGTCG GCGCGCTCGG CGCCGGTGCC
GTCTTCGCGC CGCTCTTCAT CGGCCATGCG CATGAAGCAT TCTGGCTCGA GGCAATCTAT
CGCGGCGCTG AAAACCACAT CATGCATGCG TTCCACGACG TACCGGATTG GGTGCCCTTC
GTGCCCACGC TCATGATGAT CCTCGGTTTC GCCACCGCCT GGCTCTTCTA CATCGCGCGG
CCGGATATGC CCAGGCAGCT CGCCCGCACG CATGACTCGC TCTATCAGTT CCTGCTCAAC
AAGTGGTACT TCGACGAGAT CTACAACTTC ATCTTCGTCC GTCCCGCTTT TGCGCTCGGC
CGTATCTTCT GGAAGCAGGG TGACGGCCGC ATCATCGATG GTCTCGGCCC CGATGGCATC
TCCGCCCGCG TGCTCGACAT TTCGCGCGGC GTGGTCCGTC TTCAGAGCGG CTATCTCTAC
CACTATGCCT TCGCCATGCT GCTCGGCGTC GCGGGCCTGG TGACCTGGTT CATGGTCGGG
GGAACGCACT GA
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| Protein sequence | MYSAIVFLPL LGFLVAGIFG RWLGPRGAQI VTSGLLVISA LLSVAALVSV GLGGETERVQ
VMTWIDSGDF EADWRLRIDT LTAVMLVVVT SVSALVHIYS IGYMSHDPHQ PRFFAYLSLF
TFAMLMLVTA DNFIQLFFGW EGVGLASYLL IGFWYQRPSA NAAAIKAFVV NRVGDFGLIL
GIATLFFTIG SVDFDTVFKA IPEIADSTFS FLGYDVPVVT TACLLLFMGA MGKSAQFLLH
TWLPDAMEGP TPVSALIHAA TMVTAGVFLL ARLSPIFEFS ATALTFVTVI GATTAFFAAT
VGLVQNDIKR VIAYSTCSQL GYMFVAVGVG AYEVAMFHLF THAFFKALLF LGSGSVIHAM
SDEQDMRKMG GLYKLIPVTW IMMVIGTLAL TGFPFTAGYY SKDAVIEAAY AGHNAAHMYA
FTLTVAAALL TSFYSWRLIF MTFHGTSRAS NETLSHVHES PLVMLVPLVV LAVGALGAGA
VFAPLFIGHA HEAFWLEAIY RGAENHIMHA FHDVPDWVPF VPTLMMILGF ATAWLFYIAR
PDMPRQLART HDSLYQFLLN KWYFDEIYNF IFVRPAFALG RIFWKQGDGR IIDGLGPDGI
SARVLDISRG VVRLQSGYLY HYAFAMLLGV AGLVTWFMVG GTH
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