Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3214 |
Symbol | |
ID | 5454633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3431006 |
End bp | 3432550 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640878803 |
Product | proton-translocating NADH-quinone oxidoreductase, chain M |
Protein accession | YP_001414477 |
Protein GI | 154253653 |
COG category | [C] Energy production and conversion |
COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG GCAATATTCT CTCGCTCATC ACCTTCCTGC CGCTCATCGG CGCGCTCGTC ATTCTGGCGA CGCGCGGCGA CGAGGCGACC GTCGCCCGCA ATGCGCGCTA CGTCGCGCTG TGGACTACGG GCGCCACCTT CCTCGTCTCG CTCTACATCT GGTGGAAGTT CGATCCCACC ACGGCCGATT TCCAGTTCGT CCAGCAGACG GAGTGGCTCG GCGGCGCCAT CAACTACCAT ATGGGGGTCG ACGGCATCTC GATGCTCTTC GTCATCCTGA CGACCTTCCT GATGCCCGCC TGCATTCTCG CCAGCTGGAC ATCCATAAAT ACGCGCGTGA AGGAATACAT GATCGCCTTC CTCGTGCTGG AGACGCTGAT GATCGGCGTC TTCTGCGCGC TGGATTTGGT GCTCTTCTAT CTTTTCTTTG AAGGCGGCCT CATCCCGATG TTCCTCATCA TCGGCGTCTG GGGCGGCGCG CGCCGCATCT ATGCGAGCTT CAAGTTCTTC CTCTACACTT TCGTCGGCTC GGTGCTGATG CTGCTCGCCA TCATGGCGAT GTACTGGAGT GCCGGCACCA CCAGCATCCC CGTATTGCTG GAACATGACT TCCCGGCCGG TATGCAGTTC TGGCTATGGC TCGCCTTCTT CGCCTCCTTC GCGGTGAAGA TGCCGATGTG GCCGGTCCAC ACCTGGCTGC CGGATGCGCA TGTGGAGGCG CCGACAGCGG GCTCCGTCAT CCTGGCGGGC ATCCTGCTCA AGATGGGCGG CTACGGCTTC CTGCGTTTCT CGCTGCCCAT GTTCCCGGTC GCCTCCGCCG ATCTTGCCTG GCTCGTCTTC GGCCTCAGCG TCATAGCGAT CGTCTATACG TCGCTCGTTG CGCTGGTGCA GGAGGATATG AAAAAGCTGA TCGCTTATTC GTCAGTCGCG CATATGGGCT TCGTGACGAT GGGTATCTTC GCCGCCAACC AGCAGGGCGT GCAGGGCGGC ATCTTCCAGA TGCTTTCCCA CGGCTGGGTC TCCGGCGCGC TTTTCCTCTG CGTCGGTGTC ATCTATGACC GTATCCATAC GCGCGAGATC GCGGCCTATG GCGGGCTCGT CAATCGTATG CCGCTCTATG CCGTCGCCTT CATGGTCTTC ACCATGGCGA ATGTCGGCCT GCCGGGCACC AGCGGTTTCA TCGGCGAGTT CCTGACGATC CTCGGCGTCT TCAAGGTCAA CACCTGGGTA GCCGCCATCG CCGCCACCGG CGTCATCCTC GCTGCGGGTT ACGCGCTTTA TCTCTATCGG CGCATCATCT TCGGCGTGCT GGAGAAGGAC TCGCTCAAAT CCATCGCCGA TCTGAACCGC CGCGAGGTCA TCACCATCGC GCCGCTTCTC GCCGCCACCA TCTTCTTCGG CGTCTATCCC TCGCCGATCA TGGATGTAAC GGCGGTCTCG GTTGAAAATC TCGTGACGAA TTACACGGCC GCCGTCGAGG CGTACCGCTC CGCCGAAGGG CCGGGCATGA TGTCTCAGGT CGCAAGCCTG CTGACCGGAA ACTAG
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Protein sequence | MTDGNILSLI TFLPLIGALV ILATRGDEAT VARNARYVAL WTTGATFLVS LYIWWKFDPT TADFQFVQQT EWLGGAINYH MGVDGISMLF VILTTFLMPA CILASWTSIN TRVKEYMIAF LVLETLMIGV FCALDLVLFY LFFEGGLIPM FLIIGVWGGA RRIYASFKFF LYTFVGSVLM LLAIMAMYWS AGTTSIPVLL EHDFPAGMQF WLWLAFFASF AVKMPMWPVH TWLPDAHVEA PTAGSVILAG ILLKMGGYGF LRFSLPMFPV ASADLAWLVF GLSVIAIVYT SLVALVQEDM KKLIAYSSVA HMGFVTMGIF AANQQGVQGG IFQMLSHGWV SGALFLCVGV IYDRIHTREI AAYGGLVNRM PLYAVAFMVF TMANVGLPGT SGFIGEFLTI LGVFKVNTWV AAIAATGVIL AAGYALYLYR RIIFGVLEKD SLKSIADLNR REVITIAPLL AATIFFGVYP SPIMDVTAVS VENLVTNYTA AVEAYRSAEG PGMMSQVASL LTGN
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