Gene Plav_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3214 
Symbol 
ID5454633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3431006 
End bp3432550 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content61% 
IMG OID640878803 
Productproton-translocating NADH-quinone oxidoreductase, chain M 
Protein accessionYP_001414477 
Protein GI154253653 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG GCAATATTCT CTCGCTCATC ACCTTCCTGC CGCTCATCGG CGCGCTCGTC 
ATTCTGGCGA CGCGCGGCGA CGAGGCGACC GTCGCCCGCA ATGCGCGCTA CGTCGCGCTG
TGGACTACGG GCGCCACCTT CCTCGTCTCG CTCTACATCT GGTGGAAGTT CGATCCCACC
ACGGCCGATT TCCAGTTCGT CCAGCAGACG GAGTGGCTCG GCGGCGCCAT CAACTACCAT
ATGGGGGTCG ACGGCATCTC GATGCTCTTC GTCATCCTGA CGACCTTCCT GATGCCCGCC
TGCATTCTCG CCAGCTGGAC ATCCATAAAT ACGCGCGTGA AGGAATACAT GATCGCCTTC
CTCGTGCTGG AGACGCTGAT GATCGGCGTC TTCTGCGCGC TGGATTTGGT GCTCTTCTAT
CTTTTCTTTG AAGGCGGCCT CATCCCGATG TTCCTCATCA TCGGCGTCTG GGGCGGCGCG
CGCCGCATCT ATGCGAGCTT CAAGTTCTTC CTCTACACTT TCGTCGGCTC GGTGCTGATG
CTGCTCGCCA TCATGGCGAT GTACTGGAGT GCCGGCACCA CCAGCATCCC CGTATTGCTG
GAACATGACT TCCCGGCCGG TATGCAGTTC TGGCTATGGC TCGCCTTCTT CGCCTCCTTC
GCGGTGAAGA TGCCGATGTG GCCGGTCCAC ACCTGGCTGC CGGATGCGCA TGTGGAGGCG
CCGACAGCGG GCTCCGTCAT CCTGGCGGGC ATCCTGCTCA AGATGGGCGG CTACGGCTTC
CTGCGTTTCT CGCTGCCCAT GTTCCCGGTC GCCTCCGCCG ATCTTGCCTG GCTCGTCTTC
GGCCTCAGCG TCATAGCGAT CGTCTATACG TCGCTCGTTG CGCTGGTGCA GGAGGATATG
AAAAAGCTGA TCGCTTATTC GTCAGTCGCG CATATGGGCT TCGTGACGAT GGGTATCTTC
GCCGCCAACC AGCAGGGCGT GCAGGGCGGC ATCTTCCAGA TGCTTTCCCA CGGCTGGGTC
TCCGGCGCGC TTTTCCTCTG CGTCGGTGTC ATCTATGACC GTATCCATAC GCGCGAGATC
GCGGCCTATG GCGGGCTCGT CAATCGTATG CCGCTCTATG CCGTCGCCTT CATGGTCTTC
ACCATGGCGA ATGTCGGCCT GCCGGGCACC AGCGGTTTCA TCGGCGAGTT CCTGACGATC
CTCGGCGTCT TCAAGGTCAA CACCTGGGTA GCCGCCATCG CCGCCACCGG CGTCATCCTC
GCTGCGGGTT ACGCGCTTTA TCTCTATCGG CGCATCATCT TCGGCGTGCT GGAGAAGGAC
TCGCTCAAAT CCATCGCCGA TCTGAACCGC CGCGAGGTCA TCACCATCGC GCCGCTTCTC
GCCGCCACCA TCTTCTTCGG CGTCTATCCC TCGCCGATCA TGGATGTAAC GGCGGTCTCG
GTTGAAAATC TCGTGACGAA TTACACGGCC GCCGTCGAGG CGTACCGCTC CGCCGAAGGG
CCGGGCATGA TGTCTCAGGT CGCAAGCCTG CTGACCGGAA ACTAG
 
Protein sequence
MTDGNILSLI TFLPLIGALV ILATRGDEAT VARNARYVAL WTTGATFLVS LYIWWKFDPT 
TADFQFVQQT EWLGGAINYH MGVDGISMLF VILTTFLMPA CILASWTSIN TRVKEYMIAF
LVLETLMIGV FCALDLVLFY LFFEGGLIPM FLIIGVWGGA RRIYASFKFF LYTFVGSVLM
LLAIMAMYWS AGTTSIPVLL EHDFPAGMQF WLWLAFFASF AVKMPMWPVH TWLPDAHVEA
PTAGSVILAG ILLKMGGYGF LRFSLPMFPV ASADLAWLVF GLSVIAIVYT SLVALVQEDM
KKLIAYSSVA HMGFVTMGIF AANQQGVQGG IFQMLSHGWV SGALFLCVGV IYDRIHTREI
AAYGGLVNRM PLYAVAFMVF TMANVGLPGT SGFIGEFLTI LGVFKVNTWV AAIAATGVIL
AAGYALYLYR RIIFGVLEKD SLKSIADLNR REVITIAPLL AATIFFGVYP SPIMDVTAVS
VENLVTNYTA AVEAYRSAEG PGMMSQVASL LTGN