| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3210 |
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| Symbol | |
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| ID | 5453900 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3426565 |
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| End bp | 3426969 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878799 |
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| Product | methylmalonyl-CoA epimerase |
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| Protein accession | YP_001414473 |
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| Protein GI | 154253649 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
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| TIGRFAM ID | [TIGR03081] methylmalonyl-CoA epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.0791094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGGTC CCCTCAATCA CGTTGCCATC GCCGTGCCGG ACGTGCGCGC GGCGGGCGAG
ATGTACCGCA CGAAATTTGC CGCCAAGGTC TCGGACGCCG TGCCGCAGCC AGACCACGGC
GTGACCACCG TTTTCGTCGA TCTCGGCAAC ACCAAGATCG AGCTGCTGGA GCCCCTGGGT
GAGAATTCGC CCATCGCCGG CTTCCTCGCC AAGAATCCGA AGGGCGGCAT CCACCACATC
TGCATCGAGG TCGAGGATAT CGACAGCGCC TGCGAAAAAA TGAACACCGA AGGCGTCACG
ATCACCGGAA CGGGCAAGCC GCGCATCGGC GCCCATGGCA AGCCGGTCGT CTTCCTCCAC
CCGAAAGACC TTTACGGCAC GCTGGTCGAG CTGGAACAGG CATAA
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| Protein sequence | MLGPLNHVAI AVPDVRAAGE MYRTKFAAKV SDAVPQPDHG VTTVFVDLGN TKIELLEPLG
ENSPIAGFLA KNPKGGIHHI CIEVEDIDSA CEKMNTEGVT ITGTGKPRIG AHGKPVVFLH
PKDLYGTLVE LEQA
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