| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3209 |
|---|
| Symbol | |
|---|
| ID | 5453545 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 3426254 |
|---|
| End bp | 3426532 |
|---|
| Gene Length | 279 bp |
|---|
| Protein Length | 92 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640878798 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001414472 |
|---|
| Protein GI | 154253648 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5454] Predicted secreted protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.0546803 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGC CCGCAGGCCT CGCCATCTAT TTCATCCTTT GGTGGGTCAC GCTCTTCGCG
GTCCTGCCCT GGGGCATCAA ATCCCGCACC GAAAGCGGTG AGGAAGTCAT CCCCGGAACG
GATGCCGGCG CCCCCGCGCG CCATGGCCTG CTCATCAAGG CGGGCATAAC CACGATCATC
GCCGCGATCG CCTGGTCCTT TGTCGCGTGG ATATGGATCT ACCAGCCAAT CCCCCTCGAC
AGCATCCCCT TCATGCCCGA CCTCAGCAAC GAATACTGA
|
|---|
| Protein sequence | MDWPAGLAIY FILWWVTLFA VLPWGIKSRT ESGEEVIPGT DAGAPARHGL LIKAGITTII
AAIAWSFVAW IWIYQPIPLD SIPFMPDLSN EY
|
|---|
| |