| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3205 |
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| Symbol | |
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| ID | 5454557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3420724 |
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| End bp | 3422043 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640878794 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_001414468 |
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| Protein GI | 154253644 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.405464 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTTT CCAGATATTT CCTGCCCACA CTGAAGGAAA ACCCCGCCGA GGCGCAGATC
GCGTCGCACC GGCTGATGCT CCGCGCCGGC ATGGTCCGCC AGACCGCCGC AGGCATCTAT
GCCTGGCTGC CGCTCGGCCT CGCCGTGCTC CGCAAGATCG AGGGCATCGT CCGCGACGAG
CAGAAGCGGG CAGGGGCGAT CGAGCTCCTG ATGCCGACCC TCCAGTCCGC CGACCTCTGG
CGCCAGTCCG GCCGCTACGA TGCCTATGGG CCCGAAATGC TCCGCATCGT CGACCGTCAC
GAGCGCGACA TGCTCTACGG CCCCACCAAC GAGGAGATGA TCACCGACAT CTTCCGGGGC
GCCGTCCGCT CCTACCGCGA CCTGCCGCGC AACCTCTTCC ACATCCAGTG GAAGTTCCGC
GACGAGATCC GCCCCCGCTT CGGCGTCATG CGCGGCCGCG AATTCCTCAT GAAGGACGGC
TACTCCTTCG ACCTCGATGT CGAGGGTGCG CGCCGCGCTT ATCGCAAGAT GTTCGTCTCC
TATCTCCGCT CCTTCGCGCG CATGGGCCTG AAGGCGATCC CGATGGCCGC CGACACCGGC
CCCATCGGCG GCGACATGAG CCATGAATTC ATCATCCTGG CCGAGACGGG CGAGAGCGCC
GTCTTCTGCC ACCGCGACCT CGTGGACATG GCCGTCCCCG GCGACGACAT CGACTACGAG
ACGGACCTCA ACCCCGTCAT CGCCGCCCGC ACCGACCTCT ACGCCGCCAC CGACGAGAAG
CACGACGCCG CGAAGTTCGA CGCCGAAGTC CCGAAGGACA AGCAGCTCTC CGCGCGCGGT
ATCGAGGTCG GCCACATCTT CTTCTTCGGC ACCAAATATT CACAATCCAT GGGCGCCCTC
GTCACCGGGC CGGACGGCAA GGAAGTCCCC GTCCAGATGG GCTCCTACGG CATCGGCGTC
TCCCGCCTCG TCGGCGCCAT CATTGAGGCG AGCCACGACG ACGCCGGCAT CGTCTGGCCG
GATGCCGTCG CGCCCTTCAC GGTCGGTCTC ATAAATTTGA AGTCCGGTGA TGCCGAAACC
GATGCCGCCT GCGAGAGCAT CTATGAGAAG CTCACCGCGC AAGGGATCGA CGTCCTCTAT
GACGACACGG ATGAGCGCGC CGGCGCCAAG TTCTCGAACA TGGACCTGAT CGGTCTCCCT
TGGCAGCTCG TCATCGGCCC GCGCGGCCTC AAGTCTGGCA CCGTCGAACT GAAGCGCCGC
GCCACCGGCG AAAAGGAAGA ACTGAGCCCC GAAGCCGCAC TGGCGAAGAT AGCGGGGTAA
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| Protein sequence | MRLSRYFLPT LKENPAEAQI ASHRLMLRAG MVRQTAAGIY AWLPLGLAVL RKIEGIVRDE
QKRAGAIELL MPTLQSADLW RQSGRYDAYG PEMLRIVDRH ERDMLYGPTN EEMITDIFRG
AVRSYRDLPR NLFHIQWKFR DEIRPRFGVM RGREFLMKDG YSFDLDVEGA RRAYRKMFVS
YLRSFARMGL KAIPMAADTG PIGGDMSHEF IILAETGESA VFCHRDLVDM AVPGDDIDYE
TDLNPVIAAR TDLYAATDEK HDAAKFDAEV PKDKQLSARG IEVGHIFFFG TKYSQSMGAL
VTGPDGKEVP VQMGSYGIGV SRLVGAIIEA SHDDAGIVWP DAVAPFTVGL INLKSGDAET
DAACESIYEK LTAQGIDVLY DDTDERAGAK FSNMDLIGLP WQLVIGPRGL KSGTVELKRR
ATGEKEELSP EAALAKIAG
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