Gene Plav_3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3200 
Symbol 
ID5454770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3417101 
End bp3417631 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content66% 
IMG OID640878789 
Productdeaminase-reductase domain-containing protein 
Protein accessionYP_001414463 
Protein GI154253639 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0262] Dihydrofolate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA TATTTTTCGG AATGAACCAG TCGCTGGACG GCTATGTCGA CCATATGGGC 
TTTGCGCCCG GCCCCCGGCT CTTCCGTCAC TTCATCGAGC AGACGCGCGG GCTGACAGGG
AGCCTTTATG GCCGCCAGCT CTATGAGATC ATGCGGTACT GGGACGAGGA GCATCCTGAA
TGGGGAGCGC CGGAGCGCGA GTTCGCGGCG GCGTGGCGGA GCAACCCGAA ATGGGTCGTG
TCGCGCACGC TGAAATCCGT CGGGCCCAAC GCCACGCTTG TCGCGGGCGA GCTCGCGGCA
GCGATACGCA AGCTCAAAGC CGAGTTCGAC GGGGAGATCG AAGTTGGCGG ACCGGAGCTG
GCGCGAAGCC TGACGGAGCT CGGCCTGATC GACGAGTACC GGATCTATCT CCATCCCGTG
GTGCTGGGCA GCGGCACGCC CTTCTTTGCC GGTCCGCGGC CGCCGCTCCG CCTTGCCGCC
AGCGACCCGA TGGGCGAGGA CGTGATCCGG CTGACCTACG TTCCCGCCTA G
 
Protein sequence
MAKIFFGMNQ SLDGYVDHMG FAPGPRLFRH FIEQTRGLTG SLYGRQLYEI MRYWDEEHPE 
WGAPEREFAA AWRSNPKWVV SRTLKSVGPN ATLVAGELAA AIRKLKAEFD GEIEVGGPEL
ARSLTELGLI DEYRIYLHPV VLGSGTPFFA GPRPPLRLAA SDPMGEDVIR LTYVPA