Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3200 |
Symbol | |
ID | 5454770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3417101 |
End bp | 3417631 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640878789 |
Product | deaminase-reductase domain-containing protein |
Protein accession | YP_001414463 |
Protein GI | 154253639 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAAGA TATTTTTCGG AATGAACCAG TCGCTGGACG GCTATGTCGA CCATATGGGC TTTGCGCCCG GCCCCCGGCT CTTCCGTCAC TTCATCGAGC AGACGCGCGG GCTGACAGGG AGCCTTTATG GCCGCCAGCT CTATGAGATC ATGCGGTACT GGGACGAGGA GCATCCTGAA TGGGGAGCGC CGGAGCGCGA GTTCGCGGCG GCGTGGCGGA GCAACCCGAA ATGGGTCGTG TCGCGCACGC TGAAATCCGT CGGGCCCAAC GCCACGCTTG TCGCGGGCGA GCTCGCGGCA GCGATACGCA AGCTCAAAGC CGAGTTCGAC GGGGAGATCG AAGTTGGCGG ACCGGAGCTG GCGCGAAGCC TGACGGAGCT CGGCCTGATC GACGAGTACC GGATCTATCT CCATCCCGTG GTGCTGGGCA GCGGCACGCC CTTCTTTGCC GGTCCGCGGC CGCCGCTCCG CCTTGCCGCC AGCGACCCGA TGGGCGAGGA CGTGATCCGG CTGACCTACG TTCCCGCCTA G
|
Protein sequence | MAKIFFGMNQ SLDGYVDHMG FAPGPRLFRH FIEQTRGLTG SLYGRQLYEI MRYWDEEHPE WGAPEREFAA AWRSNPKWVV SRTLKSVGPN ATLVAGELAA AIRKLKAEFD GEIEVGGPEL ARSLTELGLI DEYRIYLHPV VLGSGTPFFA GPRPPLRLAA SDPMGEDVIR LTYVPA
|
| |