| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3182 |
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| Symbol | |
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| ID | 5455005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3396548 |
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| End bp | 3397702 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640878771 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001414445 |
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| Protein GI | 154253621 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.701362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGGTTG CTGGAGAAAC CTCCGGCGAT GCGCTCGGCT CGGACCTCAT GATTGCATTG
AGAGAAATTT CGACCAGGTC CATACGTTTC TCGGGAGTTG GCGGTCCCCG TATGGAGAGA
GAAGGACTTC CCTCGATATT CCCCATGTCT GATATTGCGG TAATGGGACC GCGCGAAATC
ATTCCGCGCC TTCCTCTTAT TTTTCGCCGG ATTTGGCAGA CAGTGCGACA TGCTGTCGAC
AAGAAACCTG ATGTAGTCGT TGTGATTGAT AGCCCGGAAT TCACTCATAT GGTTGCGCGG
CGAATTTATC GTCGTGCTCC GTCCATTCCC ATCGTCAATT ATGTTTTGCC AAGTGTCTGG
GCCTGGCGTC AGGGGCGCGC GCGGGCGATG AGTAAATACA TACGTCGTGT TCTTGCTCTT
CTACCCTTTG AACCGGTCTT CCTGAAGTCG GCCGGTGTGG ACTGCGTCTA TGTCGGGCAT
CCCGCGATCA ACCGGATACC TGATGAGGGA AGCGGCGCAC GGTTCCGGGC CGCTCGGGGA
ATTGACCCCA CGGGACCGGT TCTGCTGGTT TTGCCCGGAA GCCGGATCAA CGAGGTGAAG
CATCTCCTCG CTATTTTTGG CGAGACGGTG GAGAAGCTCG CAGCCGAATT GCCATCACTG
CGAGTTTTAG TGCCGACCGT TCCGCATGTG CGGGGACTTG TTGAAGCATC GGTGACGCGA
TGGCCGGTGA ACGTCGAAAT CATCGAGGAC GATGAAGAAA AGCGTGCGGC TTTCGATGCC
AGCACTGCGG CTCTTGCGGC CTCTGGCACT GTTGCGCTGG AGCTCGGTCT GGCTCGCGTT
CCGATGGTCA TAGCTTATCG CGCCGAAGCG CTGGTCGGCT GGTTTGCGCT CAAAGTACTC
AAGGTGCCAT CTGTCGTGCT CGTAAACCTC ATTCTCGACC GGCCCGCTGT TCAAGAATAT
CTGCAGGGTC GCTGCAAAGC AGATGATCTG TTGCAGGGGC TACGGCCATT GATGCGCGAC
ACTCCGGAAA GACGGCGTGC TCTGGCGGAT CTCGACGAGT TTCGTGTGCG CATGGGGGTG
ACAGGCGAGC CGCCAAGCCG ACGTGCGGCT CGGGCGGTGC TGGATATTCT GGAGCCCGTT
ACCCCTGTTG AATGA
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| Protein sequence | MLVAGETSGD ALGSDLMIAL REISTRSIRF SGVGGPRMER EGLPSIFPMS DIAVMGPREI
IPRLPLIFRR IWQTVRHAVD KKPDVVVVID SPEFTHMVAR RIYRRAPSIP IVNYVLPSVW
AWRQGRARAM SKYIRRVLAL LPFEPVFLKS AGVDCVYVGH PAINRIPDEG SGARFRAARG
IDPTGPVLLV LPGSRINEVK HLLAIFGETV EKLAAELPSL RVLVPTVPHV RGLVEASVTR
WPVNVEIIED DEEKRAAFDA STAALAASGT VALELGLARV PMVIAYRAEA LVGWFALKVL
KVPSVVLVNL ILDRPAVQEY LQGRCKADDL LQGLRPLMRD TPERRRALAD LDEFRVRMGV
TGEPPSRRAA RAVLDILEPV TPVE
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