Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3181 |
Symbol | |
ID | 5456905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 3395177 |
End bp | 3396493 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640878770 |
Product | citrate synthase I |
Protein accession | YP_001414444 |
Protein GI | 154253620 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.270593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAT TCGGAACCAA AGCCGGCGCG ATTTCAAACG CGACCCTTTC GGTGGACGGC AAGTCTTACG AGTTGCCAGT CTATGGCGGC TCACTCGGTC CGAGCGTCGT AGATATCTCC GCCCTATACG GCAAAAGCGG ACACTTCACT TACGACCCTG GCTTCACGTC GACCGCTAGC TGCGAATCCG ACATCACGTA TATCGATGGC GAAGAAGGCG TGTTGCTGTA TCGGGGCTAT CCGATCGATC AGCTGGCCGA TCACGGCAAT TTCATCGAAA CCTGTTTTTT GCTGCTAAAT GGCGACCTGC CGACCGCAGC CGAATACCGG GAATTCGAGC GCGCCATCAC CATGCACACG ATGGTGCACG AACAGATGAC CTTTTTCCTG CGCGGATTCC GCCGGGATGC TCATCCCATG GCCATCATGT GTGGCATGGT CGGAGCACTT TCCGCCTTCT ATCATGACTC CACCGACATC AACGATCCCA CGCAGCGCAT GATCGCGAGC CGCCGCCTGA TTGCGAAGAT GCCGACGATT GCGGCGATGG CATACAAATA TTCTGCCGGC CAGCCGATCG TCTATCCCCG CAACGATCTC GATTACGCGG AAAACTTCCT GCACATGTGT TTCTCGGTAC CTGCCGAGCA ATACAAGGTG GATCCCATTC TCGCTCGGGC GATGGACCGC ATTTTCATCC TGCATGCCGA TCATGAACAG AATGCCTCCA CCTCGACTGT GCGGCTTGCC GGTTCGTCAG GGGCCAATCC CTTTGCCTGC ATCGCCGCCG GTATTGCCTG TCTTTGGGGT CCGGCCCACG GTGGTGCAAA CGAAGCTGCG TTGAACATGC TCCAACAGAT CGGCACGGTC GACCGTATTC CTGAGTTCAT CAAGCGCGCC AAGGACAAGA ACGATCCCTT CCGTCTGATG GGCTTTGGTC ACCGCGTGTA CAAAAACTAC GATCCTCGCG CGCGCGTGAT GCAGCAGACA TGCCACGAAG TTCTCAACGT GCTCGGCATC AAAGACGATC CGATGCTGGA TGTAGCCTTG GAGCTTGAGA AGATCGCACT TAACGACGAG TATTTCGTCG AGAAAAAGCT CTACCCGAAT ATCGATTTCT ATTCCGGCAT CACCTTGAAG GCGATGGGTT TCCCGACGAC GATGTTCACG GTTCTCTTTG CGCTCGCCCG TACGGTGGGC TGGGTCGCTC AGTGGAATGA GATGATCGAA GATCCGGGTC AGCGTATCGG TCGTCCGCGC CAGCTTTATA CCGGCGCGCC GCGTCGCGAC TATGTTGACG TCGGGAAGCG CAAATAG
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Protein sequence | MTKFGTKAGA ISNATLSVDG KSYELPVYGG SLGPSVVDIS ALYGKSGHFT YDPGFTSTAS CESDITYIDG EEGVLLYRGY PIDQLADHGN FIETCFLLLN GDLPTAAEYR EFERAITMHT MVHEQMTFFL RGFRRDAHPM AIMCGMVGAL SAFYHDSTDI NDPTQRMIAS RRLIAKMPTI AAMAYKYSAG QPIVYPRNDL DYAENFLHMC FSVPAEQYKV DPILARAMDR IFILHADHEQ NASTSTVRLA GSSGANPFAC IAAGIACLWG PAHGGANEAA LNMLQQIGTV DRIPEFIKRA KDKNDPFRLM GFGHRVYKNY DPRARVMQQT CHEVLNVLGI KDDPMLDVAL ELEKIALNDE YFVEKKLYPN IDFYSGITLK AMGFPTTMFT VLFALARTVG WVAQWNEMIE DPGQRIGRPR QLYTGAPRRD YVDVGKRK
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