| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3181 |
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| Symbol | |
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| ID | 5456905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3395177 |
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| End bp | 3396493 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640878770 |
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| Product | citrate synthase I |
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| Protein accession | YP_001414444 |
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| Protein GI | 154253620 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0372] Citrate synthase |
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| TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.270593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAT TCGGAACCAA AGCCGGCGCG ATTTCAAACG CGACCCTTTC GGTGGACGGC
AAGTCTTACG AGTTGCCAGT CTATGGCGGC TCACTCGGTC CGAGCGTCGT AGATATCTCC
GCCCTATACG GCAAAAGCGG ACACTTCACT TACGACCCTG GCTTCACGTC GACCGCTAGC
TGCGAATCCG ACATCACGTA TATCGATGGC GAAGAAGGCG TGTTGCTGTA TCGGGGCTAT
CCGATCGATC AGCTGGCCGA TCACGGCAAT TTCATCGAAA CCTGTTTTTT GCTGCTAAAT
GGCGACCTGC CGACCGCAGC CGAATACCGG GAATTCGAGC GCGCCATCAC CATGCACACG
ATGGTGCACG AACAGATGAC CTTTTTCCTG CGCGGATTCC GCCGGGATGC TCATCCCATG
GCCATCATGT GTGGCATGGT CGGAGCACTT TCCGCCTTCT ATCATGACTC CACCGACATC
AACGATCCCA CGCAGCGCAT GATCGCGAGC CGCCGCCTGA TTGCGAAGAT GCCGACGATT
GCGGCGATGG CATACAAATA TTCTGCCGGC CAGCCGATCG TCTATCCCCG CAACGATCTC
GATTACGCGG AAAACTTCCT GCACATGTGT TTCTCGGTAC CTGCCGAGCA ATACAAGGTG
GATCCCATTC TCGCTCGGGC GATGGACCGC ATTTTCATCC TGCATGCCGA TCATGAACAG
AATGCCTCCA CCTCGACTGT GCGGCTTGCC GGTTCGTCAG GGGCCAATCC CTTTGCCTGC
ATCGCCGCCG GTATTGCCTG TCTTTGGGGT CCGGCCCACG GTGGTGCAAA CGAAGCTGCG
TTGAACATGC TCCAACAGAT CGGCACGGTC GACCGTATTC CTGAGTTCAT CAAGCGCGCC
AAGGACAAGA ACGATCCCTT CCGTCTGATG GGCTTTGGTC ACCGCGTGTA CAAAAACTAC
GATCCTCGCG CGCGCGTGAT GCAGCAGACA TGCCACGAAG TTCTCAACGT GCTCGGCATC
AAAGACGATC CGATGCTGGA TGTAGCCTTG GAGCTTGAGA AGATCGCACT TAACGACGAG
TATTTCGTCG AGAAAAAGCT CTACCCGAAT ATCGATTTCT ATTCCGGCAT CACCTTGAAG
GCGATGGGTT TCCCGACGAC GATGTTCACG GTTCTCTTTG CGCTCGCCCG TACGGTGGGC
TGGGTCGCTC AGTGGAATGA GATGATCGAA GATCCGGGTC AGCGTATCGG TCGTCCGCGC
CAGCTTTATA CCGGCGCGCC GCGTCGCGAC TATGTTGACG TCGGGAAGCG CAAATAG
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| Protein sequence | MTKFGTKAGA ISNATLSVDG KSYELPVYGG SLGPSVVDIS ALYGKSGHFT YDPGFTSTAS
CESDITYIDG EEGVLLYRGY PIDQLADHGN FIETCFLLLN GDLPTAAEYR EFERAITMHT
MVHEQMTFFL RGFRRDAHPM AIMCGMVGAL SAFYHDSTDI NDPTQRMIAS RRLIAKMPTI
AAMAYKYSAG QPIVYPRNDL DYAENFLHMC FSVPAEQYKV DPILARAMDR IFILHADHEQ
NASTSTVRLA GSSGANPFAC IAAGIACLWG PAHGGANEAA LNMLQQIGTV DRIPEFIKRA
KDKNDPFRLM GFGHRVYKNY DPRARVMQQT CHEVLNVLGI KDDPMLDVAL ELEKIALNDE
YFVEKKLYPN IDFYSGITLK AMGFPTTMFT VLFALARTVG WVAQWNEMIE DPGQRIGRPR
QLYTGAPRRD YVDVGKRK
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