| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3169 |
|---|
| Symbol | |
|---|
| ID | 5455164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3381686 |
|---|
| End bp | 3383194 |
|---|
| Gene Length | 1509 bp |
|---|
| Protein Length | 502 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640878758 |
|---|
| Product | anthranilate synthase component I |
|---|
| Protein accession | YP_001414432 |
|---|
| Protein GI | 154253608 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0147] Anthranilate/para-aminobenzoate synthases component I |
|---|
| TIGRFAM ID | [TIGR00564] anthranilate synthase component I, non-proteobacterial lineages |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.276011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.09914 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCGC CCGACTACGC CAGTTTCGAG GCGTCGTACA ACGCGGGTAC GGCGCAGGTG
GTCTATGCGC GTCTCGTCGC GGACCTCGAA ACGCCTGTCT CCGCCATGCT CAAGATCGCG
GACGGAAAGC CGAACAGCTT CCTGCTCGAA TCCGTCGAGG GCGGCGACAG CCGCAACCGC
TATTCGATCA TCGGCTTCGC GCCGGATGCC ATCTGGCGGA CGCGGGGCGA CAAGGCGGAG
CTGAACCGCA AGGCCCGCTT CGGGGATACT TACGAGCCCT GCCCCGGCGG CGCGCTGAAG
AGCCTGCGTG CCTTCATCGA GGAAAGCCGC ATCGACCTGC CGGAGGAGCT GCCGCCGATG
GCCGCCGGCG TCTTCGGCTA TATGAGCTAC GACACGGTGC GCCTGATGGA GCACCTGCCG
AACGAGAACC CGGACGCGCT CGGCTTGCCG GACGGCATCT TCATCCGTCC AACGATCATC
GCCGTCTTCG ATTCCGTGAA GGACGAAGTT ACCGTCGTCA CGCCCGTGCG GCCGGAGCCC
GGCGTCAGCG CACATGCCGC CTATACGCGC GCGAGCGAAC GTGTCGGCGA TGTGATCGCC
GAGTTCGATA CGGCGCTGCC GCATCTCCAC CGCGATGCGG AAATCGGGCC GCTCGAAGAG
CCGTGCTCCA ACACGCCCAA GGATGCCTAT TTCGGCATGG TCGCCCGTGC GAAGGAATAC
ATCGCCGCCG GCGACATTTT TCAGGTCGTG CTCTCGCAGC GTTTCGAGGC GCCGTTCGAG
CTGCCGCCCT TCGCGCTCTA CCGGGCGCTC CGCCGCATCA ACCCGTCGCC CTTCCTTTAT
TTCCTGAATT TCGAGGATTT CTCCATCGTC GGCTCGAGCC CGGAAATTCT CGTCCGCGTG
CGGAACAACC GCGTCACCAT CCGCCCTATC GCGGGCACGC GCCATCGCGG AAAGAACAAG
GCGGAAGACG AGGCGATCTC CGAAGAACTC CTCGCCGATC CGAAGGAGCG CGCCGAGCAC
CTCATGCTGC TCGATCTCGG GCGCAACGAT GTCGGCCGCG TCTCGAAGAT CGGTTCGGTC
GATGTGACGG AACGTTTCGC GCTCCAGTAC ACATCGCACC TCATCCACAT CGTCTCGAAC
GTCGAAGGCG ACCTCGATCC CGCCTATGAC GCGATTTCCG CCCTTGTCGC GGGCTTCCCG
GCAGGCACCG TTTCCGGCGC GCCGAAAGTC CGCGCGATGG AAATCATCGA CGAACTCGAA
CTCGAAAAGC GCGGCCCCTA TGCCGGCTGC GTCGGCTACT TCTCGGCGGC GGGCGAAATG
GACACCTGCA TCGTGCTCCG CACCGCCATC GTCAAGGACG GCAAGATGTA CGTCCAGGCA
GGCGGCGGCG TGGTCGCGGA TTCAAGCCCC GAAGGCGAGT ATCAGGAAAG CGTCAACAAG
GCCAAGGCCC TCTTCCGCGC GGCGGAAGAA GCCGTGCGCT ACGCATCGCA GGTGGGGAAA
AGGCAGTAA
|
|---|
| Protein sequence | MISPDYASFE ASYNAGTAQV VYARLVADLE TPVSAMLKIA DGKPNSFLLE SVEGGDSRNR
YSIIGFAPDA IWRTRGDKAE LNRKARFGDT YEPCPGGALK SLRAFIEESR IDLPEELPPM
AAGVFGYMSY DTVRLMEHLP NENPDALGLP DGIFIRPTII AVFDSVKDEV TVVTPVRPEP
GVSAHAAYTR ASERVGDVIA EFDTALPHLH RDAEIGPLEE PCSNTPKDAY FGMVARAKEY
IAAGDIFQVV LSQRFEAPFE LPPFALYRAL RRINPSPFLY FLNFEDFSIV GSSPEILVRV
RNNRVTIRPI AGTRHRGKNK AEDEAISEEL LADPKERAEH LMLLDLGRND VGRVSKIGSV
DVTERFALQY TSHLIHIVSN VEGDLDPAYD AISALVAGFP AGTVSGAPKV RAMEIIDELE
LEKRGPYAGC VGYFSAAGEM DTCIVLRTAI VKDGKMYVQA GGGVVADSSP EGEYQESVNK
AKALFRAAEE AVRYASQVGK RQ
|
|---|
| |