Gene Plav_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3164 
Symbol 
ID5454526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3376725 
End bp3377132 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content62% 
IMG OID640878753 
Producthypothetical protein 
Protein accessionYP_001414427 
Protein GI154253603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.147575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.188251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAAGA AGCCAGGCAC CGCCCGCACG ACTGTTCTCG GCGCCGTCAT TCTCGGACTG 
TCGGCGACGA TGGCCGCCGC GCCCGCCGTT GCGATGGATC GCATGGCGCA AGCGCAGCCG
CAGGAAGGCG CGTTTTCCGA TCAGCAGCTC CAGGCTTATG CAAAGTCGGT GATCGAAGTG
CAGCAGATCA ACATGTCGAT GGAGCAGGAG ATGCAGGCCG CGCAGGACCC GGCCGACAAG
GAGGCCGTGC AGAAGCAGGC CTATACCGAC CTTGAAGCCG TCATCGCGTC CAACGGCCTT
TCCGTCGAGG AATACAACGC CATCACCGCG CAGGCGCAGA GCGATGAAGC CACACGCGAA
AAGGTGACGG CCTATCTCCA GCAGATGCAG GGCGGCGGCA ATATGTAA
 
Protein sequence
MRKKPGTART TVLGAVILGL SATMAAAPAV AMDRMAQAQP QEGAFSDQQL QAYAKSVIEV 
QQINMSMEQE MQAAQDPADK EAVQKQAYTD LEAVIASNGL SVEEYNAITA QAQSDEATRE
KVTAYLQQMQ GGGNM