| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3155 |
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| Symbol | |
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| ID | 5456896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3370725 |
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| End bp | 3371558 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640878744 |
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| Product | 2-dehydro-3-deoxyphosphooctonate aldolase |
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| Protein accession | YP_001414418 |
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| Protein GI | 154253594 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase |
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| TIGRFAM ID | [TIGR01362] 3-deoxy-8-phosphooctulonate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.211781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.070765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCGA ACCAGACCGT CAGGATCGGC AACCTCGAAA TCGCCAACGA CAAGCCCTTC
GTGCTGATCG CGGGACCCTG CCAGCTCGAA ACGCGGCAGC ATGCTTTCGA CATGGCGGGC
GCGGTGAAGG AAATCACAGA CCGGCTGGGC ATCGGCTTCA TCTACAAGAC GTCATTCGAC
AAGGCGAATC GCACGAGCCG CAACGCGACG CGCGGCCTCG GCCTCGAACT GGCGCTGCCG
ATCTTCGAAG ACCTGAAGAA GGAACTCGGC CTGCCGGTGC TGACGGACGT ACATGAACGC
GATCAATGCG CGGAAGTGGC GAGTGTTGTC GACGTGCTGC AGATCCCGGC CTTTCTCTGC
CGCCAGACGG ACCTGCTGGA AGCGGCAGCG CAGACAGGCA AGGTCGTCAA TGTGAAGAAG
GGCCAGTTCC TCGCGCCCTG GGACATGAAG AACGTCGTCA ACAAGGTGGT GGATGCGGGC
AATCCGAACG TGCTCGCGAC CGAGCGCGGC GTGAGCTTCG GCTACAACAC GCTGGTGAAC
GACATGCGCG CGCTGCCGAT CATGAAAGAG CAGTGCCGGT GCCCCGTCGT GATCGACGCG
ACGCATTCCG TGCAGCAGCC GGGCGGGCAG GGCACGGCAT CGGGCGGCGA CCGCCGCATG
GTGCCTCATA TTGCCACCGC CGCCGTATCG CTCGGTGTCG CCGCCGTCTT CATCGAAACC
CACCAGGACC CGGACAATGC ACCGTCCGAC GGGCCCAACA TGGTGAAGCT CGACGAGCTT
GAGGCGCTGC TCGCGCGCCT CAGGAAGTTC GACGAGTTGG CGAAGGTGGC CTAG
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| Protein sequence | MPANQTVRIG NLEIANDKPF VLIAGPCQLE TRQHAFDMAG AVKEITDRLG IGFIYKTSFD
KANRTSRNAT RGLGLELALP IFEDLKKELG LPVLTDVHER DQCAEVASVV DVLQIPAFLC
RQTDLLEAAA QTGKVVNVKK GQFLAPWDMK NVVNKVVDAG NPNVLATERG VSFGYNTLVN
DMRALPIMKE QCRCPVVIDA THSVQQPGGQ GTASGGDRRM VPHIATAAVS LGVAAVFIET
HQDPDNAPSD GPNMVKLDEL EALLARLRKF DELAKVA
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