| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3151 |
|---|
| Symbol | |
|---|
| ID | 5455128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 3367102 |
|---|
| End bp | 3367566 |
|---|
| Gene Length | 465 bp |
|---|
| Protein Length | 154 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640878740 |
|---|
| Product | 7-cyano-7-deazaguanine reductase |
|---|
| Protein accession | YP_001414414 |
|---|
| Protein GI | 154253590 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0780] Enzyme related to GTP cyclohydrolase I |
|---|
| TIGRFAM ID | [TIGR03139] 7-cyano-7-deazaguanine reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0333619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.222915 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAAGA AGCCCGTGAA AGACTTGAAG CAGCTCGGCC ATGCAACGCC GGTTCCCGCC
TCGCCGGAAG AAGCCACGCT GGAGCGCGTG CCAAATCCGC ATCCGGACGC CAACTACGTC
GCGCGCTTCA CCGTACCGGA ATTCACGTCC CTTTGCCCCG TCACCGGCCA ACCGGATTTT
GCACACCTTG TCATCGACTA TGTGCCGGGC AAATGGCTCA TCGAGTCGAA ATCGTTGAAG
TTGTATCTGC AATCGTTTCG CAATCACGGG GCGTTTCACG AAGATTGCAC TCTCGCCATC
GGCAAGCGCC TGGCCGGAAC CCTGGCTCCC AAATGGCTGC GCATCGGCGG CTACTGGTAT
CCGCGCGGCG GCATCCCGAT CGACGTTTTC TGGCAAAAAG GCAAGCTGCC TGCGGGTGTT
TGGGTCCCGG ATCAGGGCGT TGCGCCCTAT CGCGGGCGAG GATAG
|
|---|
| Protein sequence | MAKKPVKDLK QLGHATPVPA SPEEATLERV PNPHPDANYV ARFTVPEFTS LCPVTGQPDF
AHLVIDYVPG KWLIESKSLK LYLQSFRNHG AFHEDCTLAI GKRLAGTLAP KWLRIGGYWY
PRGGIPIDVF WQKGKLPAGV WVPDQGVAPY RGRG
|
|---|
| |