| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3141 |
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| Symbol | |
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| ID | 5454186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3354987 |
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| End bp | 3356012 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640878731 |
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| Product | pyruvate dehydrogenase (acetyl-transferring) |
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| Protein accession | YP_001414405 |
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| Protein GI | 154253581 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
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| TIGRFAM ID | [TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.29724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCA AACCTCCCCA GAAAAAGCCG GCCAAGAAAA GCGACAGCCC AGCCCCGCTC
TCCGAAGAAG ACGATCTGAG AGCCTATCGC GACATGTTGC TGATCCGCCG GTTCGAGGAG
AAAGCGGGCC AGATGTACGG CATGGGGCTC ATTGGAGGTT TCTGCCACCT CTATATCGGC
CAGGAAGCAG TCGTCATCGG CATGCAGATG GCGATCGAGG AGGGCGACCA GGTCATCACC
GGCTATCGCG ATCACGGACA TATGCTCGCA TGCGGCATGG ACCCCAAGGG CGTCATGGCG
GAACTCACTG GACGTGACGG CGGCTACTCG CGCGGCAAAG GCGGTTCGAT GCACATGTTC
AGCCGCGACA AGAACTTCTT CGGTGGCCAC GGCATCGTGG GAGCCCAGGT GCCACTCGGC
ACGGGCCTCG CCTTCGCCAA TCGCTACCGC GAAAATGATC GTGTCTGCCT CGCCTATTTT
GGCGACGGCG CCGCCAACCA GGGGCAGGTC TATGAGAGCT TCAACATGGC GGAGCTCTGG
AGCCTGCCGG TCGTCTATGT GATCGAGAAC AACCAATACG CAATGGGAAC AAGCGTTGCT
CGTTCGTCCG CGCAGACGGA TCTCTCGAAA CGCGGCGCAA GCTTCAACAT TCCAGGCGCA
CAAGTGGATG GGATGGACGT GCGCGCCGTG CGTGAAGCGG GGGCCCGTGC CGTCGAATGG
TGCCGTGCCG GAAAAGGCCC CTACATCCTC GAAATGAAGA CCTACCGCTA CCGCGGGCAT
TCAATGTCCG ATCCGGCGAA ATATCGGGCG AAGGAAGAAG TGAGCAAGAT GCGCGCCGAG
CACGACCCCA TCGAGCAGGT GCGAATGCGC CTGCTGGAGT CGAAGTCGCT TTCGGAGGAT
GACCTGAAAG CTATCGACAA GGAGATCAAG GCCATCGTCA ACGAAGCGGC GGAATTTGCC
CAGTCGAGCC CTGAGCCCGA TCCAAGGGAG CTTTGGACGG ACATACTTAC CGACGTGGAG
GCATGA
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| Protein sequence | MATKPPQKKP AKKSDSPAPL SEEDDLRAYR DMLLIRRFEE KAGQMYGMGL IGGFCHLYIG
QEAVVIGMQM AIEEGDQVIT GYRDHGHMLA CGMDPKGVMA ELTGRDGGYS RGKGGSMHMF
SRDKNFFGGH GIVGAQVPLG TGLAFANRYR ENDRVCLAYF GDGAANQGQV YESFNMAELW
SLPVVYVIEN NQYAMGTSVA RSSAQTDLSK RGASFNIPGA QVDGMDVRAV REAGARAVEW
CRAGKGPYIL EMKTYRYRGH SMSDPAKYRA KEEVSKMRAE HDPIEQVRMR LLESKSLSED
DLKAIDKEIK AIVNEAAEFA QSSPEPDPRE LWTDILTDVE A
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