| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3138 |
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| Symbol | |
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| ID | 5455014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3350880 |
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| End bp | 3352277 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640878728 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001414402 |
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| Protein GI | 154253578 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGATC AATACGATGT AGTTGTAATC GGCTCCGGCC CCGGCGGCTA TGTCGCCGCT
ATTCGCGCCT CACAACTCGG ATTGAAGACC GCCATTGTGG AGCGCGATGC GCTTGGCGGC
ATCTGCCTCA ACTGGGGATG CATCCCGACG AAAGCCCTGC TGCGCTCCGC TGAACTCTAC
GAAACGCTGC AAAGGCTCGA TGAATTCGGC CTGAAGGCCG ACAAGATCGG CTTTGATGCG
GATGCCGTCG TGACACGAAG CCGCAAGGTC GCCGAGCAGC TTTCGGGCGG CGTGAAATTT
CTGATGAAGA AGAACAAGAT CGACGTCATC GAAGGTAGCG GTCGTCTCGC CGGCGCCGGG
CGCGTTACGA TCGAGAGCAA GGACGGAAAG AAAAACGAGA TCGGCTCAAA GAACATCATT
CTTGCAACAG GTGCCCGTGC ACGAACCATT CCCGGCTTGG AGCCGGATGG AAAACGCATC
TGGACTTACC GCGAGGCGAT GGTGCCGAAG GAAATGCCGA AATCGCTGAT CGTCGTCGGC
TCCGGTGCCA TCGGTATTGA GTTCGCCAGC TTTTATCGTG CATTCGGAGC GGACGTAACT
GTCGTCGAAG TGCTCGACCG GATACTTCCC GTGGAAGACG AAGAAATTTC GAAGGAAGCG
GCAAAGGCTT TCAAGAAGCG CGGTATCAAA ATTCTTACAG GCGCCAAAAT CGATAAAACC
GACAATGGCG CAAAAGGCAT TGCCGTGACG GTAACAGCCG GCGGCAAGAC GGAAACAATA
GAGGCCGACG TCGCGATTTC CGCCGTCGGC ATCGTCGGCA ATGTCGAAAA TCTGGGGCTG
GAAGAAGCAG GCGTCAAAGT CGAAAAGACG CATGTGACCG TCAATGAATG GCTGGAAACC
GGCGTCAAGG GCATCTATGC AATCGGCGAT CTCGTTGGTC CGCCCTGGCT GGCGCATAAA
GCAAGCCACG AGGGCGTGCT GGCCGCAGAG CGGATAGCGG GCCTCAAGGA CCTGCATCCT
CTCGATACGA CGCGCATTCC CGGCTGCACC TATTCTACGC CGCAGATCGC AAGTGTCGGG
CTGACCGAAG CGAAGGCAAA AGAGAAGGGC CACGAGGTCA AGGTCGGCCG CTTTCCATTT
CGGGCGAATG GCAAGGCCAT CGCCCTTGGC GAAATGGAAG GTTTCGTGAA AACGGTCTTC
GATGCGAAGA CAGGTGAACT GCTCGGTGCT CATATGATAG GCGCGGAAGT TACCGAACTC
ATTCAGGGCT ACGGCATCGC CATGACATTG GAGACCACCG AGGCGGACCT GATCCGCGCG
GTCTTCCCGC ATCCCACTCT CTCGGAAATG ATGGGTGAAG CAGTACTCGA TGCCTATGGC
CGGGTGCTCC ACACCTGA
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| Protein sequence | MADQYDVVVI GSGPGGYVAA IRASQLGLKT AIVERDALGG ICLNWGCIPT KALLRSAELY
ETLQRLDEFG LKADKIGFDA DAVVTRSRKV AEQLSGGVKF LMKKNKIDVI EGSGRLAGAG
RVTIESKDGK KNEIGSKNII LATGARARTI PGLEPDGKRI WTYREAMVPK EMPKSLIVVG
SGAIGIEFAS FYRAFGADVT VVEVLDRILP VEDEEISKEA AKAFKKRGIK ILTGAKIDKT
DNGAKGIAVT VTAGGKTETI EADVAISAVG IVGNVENLGL EEAGVKVEKT HVTVNEWLET
GVKGIYAIGD LVGPPWLAHK ASHEGVLAAE RIAGLKDLHP LDTTRIPGCT YSTPQIASVG
LTEAKAKEKG HEVKVGRFPF RANGKAIALG EMEGFVKTVF DAKTGELLGA HMIGAEVTEL
IQGYGIAMTL ETTEADLIRA VFPHPTLSEM MGEAVLDAYG RVLHT
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