| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3134 |
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| Symbol | |
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| ID | 5454653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3347146 |
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| End bp | 3347640 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878724 |
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| Product | CinA domain-containing protein |
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| Protein accession | YP_001414398 |
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| Protein GI | 154253574 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
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| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.582332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATTT TCCCTCGCCG CCTTGTTCAT CTCGCCGAAC TGACGCTTTC TGAAGCGAGT
CAAGCTGAAC TCCGCATCGT TACAGCCGAA AGCTGCACGG GCGGACTGAT TGCCGGGCTG
CTTACGGAAA TTCCGGGCTG CTCTTCAGTG GTTGAACGCG GCTATGTCGT TTACTCGAAC
GATGCGAAGC GCGACATGCT GGGCGTGCCG GGGGATATGC TGGCGGATTT CGGTGCGGTC
TCCGAACCTG TCGCGCGGGC GATGGCTGAG GGAGCGCTGA AGAATTCGAG AGCGGACCTC
GCCGTATCCG TTACCGGTAT CGCGGGCCCT GACGGAGGCA CGCCGATGAA GCCCGTGGGA
CTCGTTCACT TCGGCGCCGC ACGGAAAGGA CGCAGCATTC TTCATGAGGT GCACCGCCTC
GGCGATATCG GGCGCGATGA AGTCCGGATG AAGAGTATCG AGGTTGCGCT CGGACTGATC
CGGCGGATGA TCTAG
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| Protein sequence | MSIFPRRLVH LAELTLSEAS QAELRIVTAE SCTGGLIAGL LTEIPGCSSV VERGYVVYSN
DAKRDMLGVP GDMLADFGAV SEPVARAMAE GALKNSRADL AVSVTGIAGP DGGTPMKPVG
LVHFGAARKG RSILHEVHRL GDIGRDEVRM KSIEVALGLI RRMI
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