| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3120 |
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| Symbol | |
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| ID | 5453964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3330623 |
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| End bp | 3332041 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640878710 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001414384 |
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| Protein GI | 154253560 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.448872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.243798 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGAAGC ACAAGGTCAC ACGGTGGCAG ATCGCGGCCT TCGGATTGCC GTCCATTCCG
ATTTCGGCAC TTGGCCTTCC CATCGTCGTT TATCTGCCGC CCTTCTATGC CCATGACATG
GGGCTGAGCC TGACGGTTGT CGGCACGGTG TTCATGATGG CACGGTTCTG GGACGTGATT
ACCGACCCGG TGCTCGGAAT GGTGTCCGAC CGGTTTCCGA GCCGCTGGGG CCGCAGGCGG
CACTGGATCG TCATTTCCGC GCCGCTGCTG CTCATTTCCG CCTACATGCT TTTCATGCCG
ACGCCGCCTG TGACCTGGGT CTATCTAGCG GGGTGGATGT TCTTTCTCTA TATCGGCTGG
ACGCTCATCA CGATTTCTCA CATGTCGTGG GGCGCGGAAT TGTCGGCGGA TTACGACGAA
CGCTCGACCA TTCAGGGGAT GCGTGAATTC CTGCTGATCT TCGGGATGTT CACCGTGCTC
GCCCTGCCCG CCATTATCGA AAGCGTGTCC GAGGCCGGCG CGGGCGGCGC GGAGAAAGTC
GCGGCGATGG GATGGTTCAT CATCATATTG CTGCCGATCA CGATCGGGCT TGCTGTGTGG
GTGACGCCTG AATTTCCCAG CGCGCCGCAT CAACAGATCC CGTGGAAGCG CGCATGGGGC
ATGATCATGC GCAACCGGCT GCTGCAACGC GTGCTGGTGG CGGACCTGCT GGTGAACATT
GCGCCCGCGA TCACCGGCTC GCTCTATATC TTCTTCGCAT CGCACGTCAT GGGGCTGCCG
AAATCGGCGA GCCTCTTGCT GCTGATCTAT TTCATTGCAG GCTTTGTCGG CATTCCGGCG
TGGATCCGCA TGAGCCACAT TGCGGGCAAG CACAAGACGC TCGCCATTGC CATGGTCTAT
GGCGCGGTCA CCCTGCCCCT CGTCGTGTTT TTTCCGCGCG GCGAATTCTG GTGGCTCTTT
GTCGGCAATT CGCTCTATGG CGTCGCCTAT GGCGCGGGAT CGTTTCTGCT GCGCTCCATC
ATGGCCGATG TCATCGACAC GGATTATCTG GAGACAGGAC AGAGGCGCAC CGGACTTTAC
TATTCGCTGC TCAGCATGAC AGCGAAGGTG GGCGCGGCGC TGGCCGTGGG CATCACCTAT
CCGCTGCTCG ACCTCATTCA GTTTACGCCT GGCGGCGAAA ACTCGCCGGA GACGCTCAAC
CAGTTCATGG CGCTCTATGT GGCCATGCCG GCACTTGTGA TGCTGGCGGC GGCGTTTGTG
ATGTGGCGCT TTCCGCTCGA CCGGGCCGCA CAGCTCGCCC TGCGGCGGAA GATCGAGGAG
CGGGACGGCA AGCACCGAGC GCATGAGGCA AGCGACGCGG CGGCAGCCGT GGCAGCAGTC
GGCACGGCGG GCGGCGTTAT CGATCCATCC GGCGACTAG
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| Protein sequence | MEKHKVTRWQ IAAFGLPSIP ISALGLPIVV YLPPFYAHDM GLSLTVVGTV FMMARFWDVI
TDPVLGMVSD RFPSRWGRRR HWIVISAPLL LISAYMLFMP TPPVTWVYLA GWMFFLYIGW
TLITISHMSW GAELSADYDE RSTIQGMREF LLIFGMFTVL ALPAIIESVS EAGAGGAEKV
AAMGWFIIIL LPITIGLAVW VTPEFPSAPH QQIPWKRAWG MIMRNRLLQR VLVADLLVNI
APAITGSLYI FFASHVMGLP KSASLLLLIY FIAGFVGIPA WIRMSHIAGK HKTLAIAMVY
GAVTLPLVVF FPRGEFWWLF VGNSLYGVAY GAGSFLLRSI MADVIDTDYL ETGQRRTGLY
YSLLSMTAKV GAALAVGITY PLLDLIQFTP GGENSPETLN QFMALYVAMP ALVMLAAAFV
MWRFPLDRAA QLALRRKIEE RDGKHRAHEA SDAAAAVAAV GTAGGVIDPS GD
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