| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3119 |
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| Symbol | |
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| ID | 5454780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3329817 |
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| End bp | 3330467 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640878709 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001414383 |
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| Protein GI | 154253559 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.603346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.30493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCTCA AGGCCGCCAT TCTTCCCGTG ACGCCGTTTC AGCAGAACTG CACGCTGATG
TGGAACGATG AAAACATGCG CGGCGCGGTC AGCGACCCCG GCGGCGATCT GGAGCGCATC
AAGGCTGCGG CGGCCGAGGC CGGCGTCACC ATCGAGAAAA TCCTGCTGAC CCATGGCCAT
CTCGATCATG CATCGGCGGC CGGCGATCTC GCGCGTGAGC TTGGCGTGCC GGTCGAAGGC
CCGCATGAGG ACGACCTGTT CCTGATCGAG GCGCTGCCGG ACCAGGCGGC CAAATACGGG
TTTCCGCCGG TCGGTGCCTT CCGGCCGGAC CGCTGGCTGA AGGATGGCGA CCAGGTGACG
TTTGCCGGGC TCACATTCGA TGTGCGCCAC TGCCCCGGCC ACACGCCCGG CCATGTGGTT
TTCTTCCATG AACCGTCGCG GCTGGCGATT GTCGGCGATG TGCTGTTTCA GGGCTCCATC
GGGCGCACGG ATTTTCCGCG CGGCGACCAT GGCGCGCTTG TCCGCTCGAT CCGCGAACGG
CTCTGGCCGC TTGGCGACGA TGTGACCTTT GTACCCGGAC ATGGGCCGCT TTCGACCTTT
GGCGTCGAGC GGCGCACAAA CCCCTTTGTG GCCGACGAGA ATTTCGCCTG A
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| Protein sequence | MGLKAAILPV TPFQQNCTLM WNDENMRGAV SDPGGDLERI KAAAAEAGVT IEKILLTHGH
LDHASAAGDL ARELGVPVEG PHEDDLFLIE ALPDQAAKYG FPPVGAFRPD RWLKDGDQVT
FAGLTFDVRH CPGHTPGHVV FFHEPSRLAI VGDVLFQGSI GRTDFPRGDH GALVRSIRER
LWPLGDDVTF VPGHGPLSTF GVERRTNPFV ADENFA
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