| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3112 |
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| Symbol | |
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| ID | 5453403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3322629 |
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| End bp | 3323792 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640878702 |
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| Product | DNA replication ATPase |
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| Protein accession | YP_001414376 |
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| Protein GI | 154253552 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.347103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.240633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACA CCGAGATTCC CGAAAGCGAC CGGCTTGGCG ACTTCCCGCA TCCGCGCGAG
GCGGCGGCGC TTGTCGGGCA GGAGGCGGCG GAGCGCGCCC TTTTTGAAGC CTTCATGAGC
GGCAGGATGC ACCATGCCTG GCTGCTTACA GGGCCTAAGG GTATCGGCAA GGCGACGCTC
GCCTATCGGA TGGCGCGATT TGCGCTGCAT TACGGAACGG CGGAGGCCGC AAGGGCGGCA
GGAGCACGGG ATCTGAACAT CAGCCCGGAT GAGGGGGTGT TCCATCAGGT AGCTGCGGGG
AGCCACCCGA ACCTGCTTAC CGTACGCCGC CCGTGGGACG ACAAGACGAA GAAGCTGAAG
ACCGTTATTC CCGTGGATGA GGTGCGCCGG ATCGGACATT TCTTCGGGCT GACGGCGACG
GAGCGCGGGG CCTGGCGCGT CGTCATCATC GACAGCGCCG ACGAGATGAA CGCCAATTCG
GCCAATGCGC TTTTGAAGGC GCTGGAGGAG CCGCCGCCGA ACGGGCTTTT CCTCGTGCTG
AGCCATCAGC CGGGTCAGCT TCTGCCGACG ATCCGCTCAC GCTGCCGGAC GCTGCGGATG
ACGCCGCTGG CGGAGGGCGA CATCGTGAGC ATGATGGAAC CCGCCGAGCG GCAGGCGGAA
GCGCGAGCGA AGGAAGCGAA GCGGAAATTC GCCATGACGC CGGCGGCGGA GCGGCAACCG
ATCGCCCAAC TGGCCGAAGG CAGCGCGGGG AGGGCGCTTT CCATTGCGGC AGGCGGCGGG
CTCGGGCTCT ACAAGGAACT GGCGGGCCTG CTTGCCGGGC TGCCGCGCCT CGACATTGCG
GCGGTTCACG CCTTTGCCGA CAAGGCGGGC CGCAAGGGGG CGGACGATGC CTATGAGACC
ATGATCGAGC TGCTGACGCA CTGGCTGCAG CGGCTGGTGC GGACGGGCGC GGGGCTTCAT
CCCGGCCCCG ACATCGTGGC CGGCGAGGGC GCGGCGATGG CGCGGCTTGC CGCCGGGGGC
AGCCTTGATC GCTGGGTCGA GGTATGGGAA AAGATCAATC AATCAACGGC CCGCGGCGAG
GCGCTGAACA CGGATCGCAA GCTCGTGATC CTGAACGTGT TTTCGATGCT CGAAGCAGCC
GCGAGCGAGC GCGCCGGCGC GTGA
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| Protein sequence | MSDTEIPESD RLGDFPHPRE AAALVGQEAA ERALFEAFMS GRMHHAWLLT GPKGIGKATL
AYRMARFALH YGTAEAARAA GARDLNISPD EGVFHQVAAG SHPNLLTVRR PWDDKTKKLK
TVIPVDEVRR IGHFFGLTAT ERGAWRVVII DSADEMNANS ANALLKALEE PPPNGLFLVL
SHQPGQLLPT IRSRCRTLRM TPLAEGDIVS MMEPAERQAE ARAKEAKRKF AMTPAAERQP
IAQLAEGSAG RALSIAAGGG LGLYKELAGL LAGLPRLDIA AVHAFADKAG RKGADDAYET
MIELLTHWLQ RLVRTGAGLH PGPDIVAGEG AAMARLAAGG SLDRWVEVWE KINQSTARGE
ALNTDRKLVI LNVFSMLEAA ASERAGA
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