| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3111 |
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| Symbol | |
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| ID | 5455271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3321826 |
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| End bp | 3322503 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640878701 |
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| Product | peptidase M23B |
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| Protein accession | YP_001414375 |
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| Protein GI | 154253551 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.324565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.312255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGAC GACACCTCAC GACCCGATTT TTGCCGTCCT TGCTTCAGGC GACCCTTCCC
ATCCTTCTCG CAGCTCTCTT CTTCCTTCCA GCTTCTCCTG CAGCGGCCCG CAATAACGAA
ACGGGCATCA CGGAGATGGC GTCGGTGCCG CTGATGAAGC CGATCGTGGA ACCGGAAGAG
CGGACGGTGC GCGGCCTTCA TTTCATCGAC CCGGTGGACG TGACCAAGGC GAGGATGACC
TCCGGCTTCG GCTGGCGGAT GCACCCCGTC CTCAAGACCA AGAAGATGCA CAAGGGCGTC
GATTATGCCG CCCCGAAGGG TACGCCGGTC TATGCGACCG AAGACGGCGT TGTCGGCATG
GCGGGATGGC GCGGCAATTA CGGCAAGCTC GTCACGGTGA AGCATGCCGA ACATGTCGAA
ACCTACTACG CGCATCTCTC CGGCTATGCG CCCGGCATCA AAACCGGAGC GAAGGTCAAA
AAGGGCGACG TGATTGGCTA TATCGGCATG ACGGGTCTCG CGACCGGCAA TCATCTCTAT
TACGAGGTGG CGATCAACGG CGAGCGCGTC GATCCGCTGG CGGACGATCT CAACGAGCAG
GTCAACATAT TGGCCGCGCG GGCACCCCGT CCCAGCAGCA AGGTTGCCGG AACGCGCGGG
CTGACCGAAG CTCAATAA
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| Protein sequence | MKRRHLTTRF LPSLLQATLP ILLAALFFLP ASPAAARNNE TGITEMASVP LMKPIVEPEE
RTVRGLHFID PVDVTKARMT SGFGWRMHPV LKTKKMHKGV DYAAPKGTPV YATEDGVVGM
AGWRGNYGKL VTVKHAEHVE TYYAHLSGYA PGIKTGAKVK KGDVIGYIGM TGLATGNHLY
YEVAINGERV DPLADDLNEQ VNILAARAPR PSSKVAGTRG LTEAQ
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