| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3107 |
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| Symbol | |
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| ID | 5455290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3317315 |
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| End bp | 3318658 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640878697 |
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| Product | MmgE/PrpD family protein |
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| Protein accession | YP_001414371 |
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| Protein GI | 154253547 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.367847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.515928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCATG TCTCTCCCTC CGCTGCCGCA CCGGTTTCCC TGACCGGGCA GCTGGTCAAG
CTGATCCGTG AAAAACCGGT AACGGCAGCC GATCTCGAAG CCGCCGCCTT GTTTACCCTT
GATGCAGTGG CAAACAGCCT CGCCGGCCGG AATTCCGATC CAGGGCGGAT CCTGCTCAAA
TGGTGGCAAT CATCGGCTTC ATCGAATGCC GCGCCCGAGC CCGAACGGCT GGCTTTTTTG
ATGGGTGCGC TCTGCCACAT TCTCGAAACG GATGATCTGC ATCGCATGTC GGTAGTTCAT
CCCGGCTGCG TCGTCGTTCC CGCAGCCTGG GCGCTTGCGG CCCGGCGGAA TGCCGGCGGC
CGCGCATTGC TGATTGCGAT CCTGCATGGC TTCGAAGCGG CAACGCGCAT CGGCATGGCT
GTTGGCCCCG CGCATTACCG CATCTGGCAT AACACCGCCA CTTGCGGACC CTTTGGCGCG
GCAATGGCGG CAAGTGAGCT CTTGAAACTC AACAACGAGG CTGCGGTTGA CGCGCTCGGA
AATGCAGGCA GCCAATCCTC CGGCCTCTGG CAGTTTCTGG AGACCGGCGC CATGACGAAA
CATCTTCACG CCGGGCACGC CGCGCAGGCG GGCATAAAGG CTGCCGAGCT TGCGGCGTTC
GGCTTTACCG GCCCGCCGAA AATACTCGAA GGTGAAAAAG GCTTTTTCCG CGCCGCCTGC
CCCGATGCCG ATGCGGATGC TGTCATTCGC GATCCCGGCT CACCTTGGCA ACTGGTGCAG
ACATCGATCA AGCCTTGGCC TTCCTGCCGC CACACCCATC CGACGATAGA CGCAGGCGAA
GAGCTACGCG CGCGGCTGCA GGCAAATGGA GTTGAACCGG GCCGGATCAG GAAAATCGAA
GTGGCCACCT ATAGGGCGGC GATCGACGTC TGCGACCGGC CGGTGGCTTC CAGCGATTAT
GAAGCGAAAT TCTCTCTGCA GCATGCGGTA GCGGCATCGC TGCTCTGCTC ACCGGTGGAC
TTCGATGCCT TTGGCGCCTC GGCGCGGGAG CGGTGTGCAG CCTTGGCATC GCGCGTCGAA
GTGAGTGCGG CAGAGCCATG GGCATCGGCT TATCCCCGGG CGTGGGGAGG CCGCGTTCGC
CTGCAACTCG ACGACGGCAC AGAGTATGTA GCTGAGAGGG CTCACGCGAA AGGCGACCCG
GAGGCACCTC TGAGCCGGGA CGACATGATC GCGAAAGCCG AAATGTTGTT CCGGCACGGC
GGCGTTACCG AGCCGCGCCG GATCGTGGAC GATATTCTGG CCATGGCCGC GGACGGCGCT
ATGCCCGAGC TCGACCTCGT TTAA
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| Protein sequence | MNHVSPSAAA PVSLTGQLVK LIREKPVTAA DLEAAALFTL DAVANSLAGR NSDPGRILLK
WWQSSASSNA APEPERLAFL MGALCHILET DDLHRMSVVH PGCVVVPAAW ALAARRNAGG
RALLIAILHG FEAATRIGMA VGPAHYRIWH NTATCGPFGA AMAASELLKL NNEAAVDALG
NAGSQSSGLW QFLETGAMTK HLHAGHAAQA GIKAAELAAF GFTGPPKILE GEKGFFRAAC
PDADADAVIR DPGSPWQLVQ TSIKPWPSCR HTHPTIDAGE ELRARLQANG VEPGRIRKIE
VATYRAAIDV CDRPVASSDY EAKFSLQHAV AASLLCSPVD FDAFGASARE RCAALASRVE
VSAAEPWASA YPRAWGGRVR LQLDDGTEYV AERAHAKGDP EAPLSRDDMI AKAEMLFRHG
GVTEPRRIVD DILAMAADGA MPELDLV
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